Gene Bcenmc03_0587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_0587 
Symbol 
ID6122268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp644291 
End bp644968 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content73% 
IMG OID641637150 
Product2-dehydro-3-deoxy-6-phosphogalactonate aldolase 
Protein accessionYP_001763887 
Protein GI170731940 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase 
TIGRFAM ID[TIGR01182] Entner-Doudoroff aldolase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0474806 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0373848 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTCCG ACCTGACATT GCCCGCGCCG TACACGCCCC ACGCCGCCTT GATGCGCGCG 
TTCGACGCGT GTCCGCTGAT CGCGATCATG CGCGGCATCA CGCCCGCCGA AGCGGCCGAC
CATGGCCGCG CGCTGTACGA AGCCGGCTTC CGGATCGTCG AGGTGCCGCT CAACTCGCCC
GATCCGTTCG ACAGCATCGC GGCGCTACGC CGTGCGTTGC CCGACGATGC GATCGTCGGC
GCGGGCACGG TGCTGCGCGC CGAGTACGTC GATCGCGTGC AGGACGCGGG CGGCGCGTTG
ATCGTGATGC CGCACAGCGA CGCGGCCGTG ATCCGCCGAG CCCGCGAGCG CGGGCTGGCG
AGCGCGCCGG GCGTCGCGAC GCCGACCGAA GCGTTCGCGG CGCTGACGAA CGGCGCCGAC
GTGCTGAAGA TGTTCCCGGC CGAGCAGCTT GGCGTGACGG TCGTGAAAGC CTGGCGCGCG
GTGATCGACC GCGCGGTGCC GCTGATTCCG GTCGGCGGCA TTTCGCCGGA CAATATGCAG
CCGTTCCTCG ACGCCGGCGC GAACGGTTTC GGGCTCGGCT CGGCGCTGTA CCGCCCGGGC
CAGTCGGCCG ACACGACCGC GGCGCATGCG CGTGCGTTCC AGGCCGGCTT GCGCGTCGCG
CGCGGCGGAG CCGCATGA
 
Protein sequence
MPSDLTLPAP YTPHAALMRA FDACPLIAIM RGITPAEAAD HGRALYEAGF RIVEVPLNSP 
DPFDSIAALR RALPDDAIVG AGTVLRAEYV DRVQDAGGAL IVMPHSDAAV IRRARERGLA
SAPGVATPTE AFAALTNGAD VLKMFPAEQL GVTVVKAWRA VIDRAVPLIP VGGISPDNMQ
PFLDAGANGF GLGSALYRPG QSADTTAAHA RAFQAGLRVA RGGAA