| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_0579 |
|---|
| Symbol | |
|---|
| ID | 6122260 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | + |
|---|
| Start bp | 635130 |
|---|
| End bp | 635699 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641637142 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001763879 |
|---|
| Protein GI | 170731932 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3150] Predicted esterase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.000134337 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGATCCTGT ATCTGCACGG CTTCCGGTCG TCGCCGGAAT CGCAGAAGTC GCGGCTGCTC
GCCGCGCGCA TGGCCGAACT CGGCCGCACC GGCGAGTGGC GATGCCCGTC GCTGTCGGTG
TCGCCGCTCG AGGCGATCGC CGTCGCGGAA GCCGAGGTCG CGGGCGCACG CGACGTCACC
GTGATCGGCA GCTCGCTCGG CGGTTATTAC GCGACATGGC TCGCCGAAAA GCATGGCTGG
AAGGCCGTGC TGCTGAATCC GGCCATCGTG CCGCAGCGCG ATCTCGAACA GTATCTGGGC
GAACAGTCGC TGTGGCACGG CGGCGGCACG ATTGTCGTCG AGCGCCGTCA CCTGCACGAA
CTCGACGCGC TGCGCGTGCC GGCGATCACG CGCGCCGACC GCTACTATCT GTTCGCGGCG
ACCGGCGACG AAGTGCTCGA TTACCGCGAG ATGCTCGCCC ACTACCCGGG CGCGAAAACC
CGCGTGATCG ACGGCAGCGA TCACGGGATC AGCGAATTTG CCGACTATGT CGACGACGTT
CTCGCGTTTT GCGACGGAAA GACGTCTTAA
|
|---|
| Protein sequence | MILYLHGFRS SPESQKSRLL AARMAELGRT GEWRCPSLSV SPLEAIAVAE AEVAGARDVT
VIGSSLGGYY ATWLAEKHGW KAVLLNPAIV PQRDLEQYLG EQSLWHGGGT IVVERRHLHE
LDALRVPAIT RADRYYLFAA TGDEVLDYRE MLAHYPGAKT RVIDGSDHGI SEFADYVDDV
LAFCDGKTS
|
|---|
| |