Gene Bcenmc03_0568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_0568 
Symbol 
ID6122249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp625230 
End bp625703 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content70% 
IMG OID641637131 
Product17 kDa surface antigen 
Protein accessionYP_001763868 
Protein GI170731921 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3133] Outer membrane lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.533396 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000059328 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTTGACGA AAAAAACCCT CACGCTCGCG GCCATGCTGA CGGCCACGCT GACCCTCGCC 
GGCTGCTTCA CGGCACCCGG TTCGGCGGAT GTCTATAGCG TCGGCCAGGC GCAGCGCGAA
CAGACGGTCC GCATGGGCAC GGTCGAAAGC GTGCGTGCGG TGCGCATCCA GTCCGACGGC
GGCGGCAGCG CAATCGGCAC GCTCGGCGGC GGCGCACTCG GCGCGGTCGC GGGCAGCGCG
ATCGGCGGCG GCAAAGGCTC GATCCTGACG GCGATTGCCG GCGGCCTCGT CGGTGCGGTC
GCGGGTAACG CGGTCGGCGA AAACCTCAGC ACGGCGAACG GTGTCGAAAT CACCGTGCGC
CTCGACAACG GCGATCTGCG CTCGATCACG CAGGCAGCCA GCGGCGAAGC ATTCCGCGCC
GGCGAGCGGG TACGCCTGCT GTCGAGCGGC GGCGTCACGC GCGTCACGCA CTAA
 
Protein sequence
MLTKKTLTLA AMLTATLTLA GCFTAPGSAD VYSVGQAQRE QTVRMGTVES VRAVRIQSDG 
GGSAIGTLGG GALGAVAGSA IGGGKGSILT AIAGGLVGAV AGNAVGENLS TANGVEITVR
LDNGDLRSIT QAASGEAFRA GERVRLLSSG GVTRVTH