Gene Bcenmc03_0564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_0564 
Symbol 
ID6122245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp619335 
End bp622340 
Gene Length3006 bp 
Protein Length1001 aa 
Translation table11 
GC content66% 
IMG OID641637127 
Productribonucleotide-diphosphate reductase subunit alpha 
Protein accessionYP_001763864 
Protein GI170731917 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0209] Ribonucleotide reductase, alpha subunit
[COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase 
TIGRFAM ID[TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00066464 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAAACCA CCGACAACGC GACGTCCCAG TACGAGAGCG CCTCGAGCCG TCCGCTCGGC 
GGGACCGAAC AAGGCGCGAA GGCGCTCGCG CCGCAGGCCA CGTTCGCCGA CTACAAGGTG
ATCCGCCGCA ACGGCAGCGT GGTGTCGTTC GAACCTTCGA AGATCGCGAT CGCGGTGACC
AAGGCTTTCC TGGCCGTCAA TGGCGGGCAG GGCGCGGCAT CGGCGCGCGT ACGCGAGCAG
GTCGAGCAAC TGACGCACAA CGTCGTTCGC GCGCTCGTGC GCAGCCGCCC GAACGGCGGT
ACGTTCCATA TCGAAGACAT CCAGGACCAG GTCGAACTCG CGCTGATGCG CGGCGGCGAG
CACAACGTCG CGCGTGCGTA CGTGCTGTAT CGCGAGAAGC GTCACCTCGA GCGCCAGCAT
GCGGGCGAGG AAGCGGCGGC AGCGGGCGGC GAGTCGGCCA CCGGCATCAA CGTGGTCGAC
AACGGCGTCA CGCGCCCGCT CGACCAGAAC GCGCTGCGCG CGCTGATCGT GTCGGCATGC
GACGGCCTCG GCGCTGCGGT TAACCCTGAC CCGATCGTCG CGGAGACGGT GAAGAACCTG
TACGACGGCG TGCCGATGAG CCAGGTCTAC GACTCGGCGA TCCTCGCTGC GCGCACGATG
ATCGAAAAGG ACCCGGCGTA CAGCCAGGTC ACGGCCCGCA TCCTGCTGCA CACGATCCGT
CGCGAGATCC TCGGCGAGGA AGTCGTGCAG GCCGAGATGT CGACCCGCTA CGCCGAATAC
TTCCCGCAGT TCCTGAAGCG CGGCGTCGAC GCCGGCCTGC TCGACGACAA GCTGCTGCAG
TTCGACCTGA AGCGCCTCGG CGAAGCGCTC GACGCGAACC GCGACCTGCA GTTCGGCTAC
CTCGGCCTGC AGACGCTGTA CGACCGCTAC TTCCTGCACG TCGAAGGCAC CCGCATCGAA
ATGCCGCAGG CATTCTTCAT GCGCGTCGCG ATGGGCCTGT CGCTGAACGA GATCGACCGC
GAAACGCGCG CGATCGAGTT CTACAACGTG CTGTCGAGCT TCGACTTCAT GAGCTCGACG
CCGACGCTGT TCAACTCGGG CACGCACCGC TCGCAGCTGT CGTCGTGCTA CCTGACGACG
GTCGCGGACG ATCTCGACGG CATCTATGAA GCGCTGAAGG AAAACGCGCT GCTGTCGAAG
TTCGCCGGCG GCCTCGGCAA CGACTGGACG CGCGTGCGCG CCCTCGGCTC GCATATCAAG
GGCACGAACG GCAAGTCGCA AGGCGTGGTC CCGTTCCTGA AGGTCGTGAA CGACACGGCC
GTCGCGGTGA ACCAGGGCGG CAAGCGCAAG GGCGCGGTCT GCGCGTACCT CGAATCGTGG
CACCTCGACA TCGAGGAGTT CCTGGAGCTG CGCAAGAACA CCGGTGACGA CCGTCGCCGT
ACGCACGACA TGAACACGGC GAACTGGATT CCCGACCTGT TCATGAAGCG CGTGATGGAA
GGCGGCGACT GGACGCTGTT CTCGCCGTCG ACCTGCCCGG ACCTGCACGA CAAGTTCGGC
GCCGATTTCG AGAAGGCTTA CACGGCTTAC GAAGACAAGG TCGCGCGCGG CGAGATCAAG
CTGTTCAAGA AGATCCCGGC GGCGCAGCTG TGGCGCAAGA TGCTCGGCAT GCTGTTCGAG
ACGGGCCACC CGTGGATCAC GTTCAAGGAT CCGTGCAACG TGCGCTCGCC GCAGCAGCAC
GTCGGCGTCG TCCACTCGTC GAACCTGTGC ACGGAAATCA CGCTGAACAC GAGCGACACC
GAAATCGCGG TGTGCAACCT CGGCTCGGTG AACCTCGTCG CCCACCTGGT GAAGCAGGCC
GACGGCAGCT ACGCGCTCGA CCACGACAAG CTGAAGCGCA CGATCAGCGT CGCGATGCGC
ATGCTCGACA ACGTGATCGA CATCAACTAC TACGCGGTGC CGAAGGCGCG TAACTCGAAC
CTGAAGCACC GCCCGGTCGG GATGGGCATC ATGGGCTTCC AGGACTGCCT GCACCTGCTG
CGTACGCCGT ACGCGTCGCA AGAGGCAGTC GAGTTCGCCG ATCGTTCGAT GGAAGCCGTC
TGCTATTACG CGTACCACGC GTCGACCGAA CTGGCCGAAG AACGCGGCCG CTACTCGAGC
TACCGCGGCT CGCTGTGGGA TCGCGGCATC CTCCCGCAGG ACACGCTGAA GCTGCTGGCC
GAAGCGCGCG GCGGCTACGT CGAGGTCGAC ACGTCGGAAT CGCTCGACTG GACGGCGCTG
CGTGCGCGGA TCGCCACGCA CGGCATGCGC AACTCGAACT GCGTCGCGAT CGCGCCGACG
GCGACGATCT CGAACATCAT CGGCGTGTCG GCCTGTATCG AGCCGACCTT CCAGAACCTG
TACGTGAAGT CGAACCTGTC GGGCGAATTC ACGGTGGTGA ACGAGTATCT CGTCCGCGAC
CTGAAGGAAC GCGGCCTGTG GGACGAAGTG ATGGTCGCCG ACCTGAAGTA CTTCGACGGC
ATGCTGTCGC GCATCGACCG CATCCCGGCC GACCTGCGCG CGATCTACGC GACCGCGTTC
GAGGTCGACC CGACGTGGCT GGTCGAAGCG GCATCGCGTC GCCAGAAGTG GATCGACCAG
GCGCAGTCGC TGAACATCTA CATGGGCGGC GCATCGGGCA AGAAGCTCGA CGAGGTCTAC
AAGCTCGCAT GGCTGCGCGG CCTGAAGACG ACCTACTACC TCCGCACGAT GGCGGCGACG
CACGTCGAGA AGTCGACGGT CGCACACGGT GCGCTGAACG CAGTGCCGAC GGGCGGTGCC
GGCAGCGGCG GCTCGAGCAG CGGCGGCGCG CAAGGCGCAG CGGGCGGCTT CGGTGCGGCA
GGCGGCGCTG CATCGTCGGG CGCGGTCAAC GCTGCAGCGG CGCTCGCGCC GGTCGAAGCA
GACGGCCCGG TGTGCACGAT GCGTCCGGGC GACCCCGGCT TCGACGAATG CGAAGCGTGC
CAGTAA
 
Protein sequence
MQTTDNATSQ YESASSRPLG GTEQGAKALA PQATFADYKV IRRNGSVVSF EPSKIAIAVT 
KAFLAVNGGQ GAASARVREQ VEQLTHNVVR ALVRSRPNGG TFHIEDIQDQ VELALMRGGE
HNVARAYVLY REKRHLERQH AGEEAAAAGG ESATGINVVD NGVTRPLDQN ALRALIVSAC
DGLGAAVNPD PIVAETVKNL YDGVPMSQVY DSAILAARTM IEKDPAYSQV TARILLHTIR
REILGEEVVQ AEMSTRYAEY FPQFLKRGVD AGLLDDKLLQ FDLKRLGEAL DANRDLQFGY
LGLQTLYDRY FLHVEGTRIE MPQAFFMRVA MGLSLNEIDR ETRAIEFYNV LSSFDFMSST
PTLFNSGTHR SQLSSCYLTT VADDLDGIYE ALKENALLSK FAGGLGNDWT RVRALGSHIK
GTNGKSQGVV PFLKVVNDTA VAVNQGGKRK GAVCAYLESW HLDIEEFLEL RKNTGDDRRR
THDMNTANWI PDLFMKRVME GGDWTLFSPS TCPDLHDKFG ADFEKAYTAY EDKVARGEIK
LFKKIPAAQL WRKMLGMLFE TGHPWITFKD PCNVRSPQQH VGVVHSSNLC TEITLNTSDT
EIAVCNLGSV NLVAHLVKQA DGSYALDHDK LKRTISVAMR MLDNVIDINY YAVPKARNSN
LKHRPVGMGI MGFQDCLHLL RTPYASQEAV EFADRSMEAV CYYAYHASTE LAEERGRYSS
YRGSLWDRGI LPQDTLKLLA EARGGYVEVD TSESLDWTAL RARIATHGMR NSNCVAIAPT
ATISNIIGVS ACIEPTFQNL YVKSNLSGEF TVVNEYLVRD LKERGLWDEV MVADLKYFDG
MLSRIDRIPA DLRAIYATAF EVDPTWLVEA ASRRQKWIDQ AQSLNIYMGG ASGKKLDEVY
KLAWLRGLKT TYYLRTMAAT HVEKSTVAHG ALNAVPTGGA GSGGSSSGGA QGAAGGFGAA
GGAASSGAVN AAAALAPVEA DGPVCTMRPG DPGFDECEAC Q