| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_0546 |
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| Symbol | |
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| ID | 6122227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | - |
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| Start bp | 601220 |
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| End bp | 602131 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641637108 |
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| Product | prepilin peptidase |
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| Protein accession | YP_001763846 |
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| Protein GI | 170731899 |
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| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0204548 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0306295 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCCAG CGCCCCTGTC CGCCGTTTCC GATTCGCCCG CGAGCACGCT GCTCGCGCTG
GCGATGCTGC CGCCCGCGCT GCAGTATGCG TTCGCGGTCG TCATCGGCCT TTGCATCGGC
AGTTTCCTGA ACGTGGTGGT GCACCGGTTG CCCGTGATGA TGCAGCGCGC GTGGCAGGCC
GAGATCGCCG AAGCGACCGG CGCCGCGGGC GCCCCGCCCG ACGACGGTTA TCCGCCGCGC
TATGACCTGT GGCGCCCACG CAGCGCCTGC CCGCACTGCG GCCATGTGTT GCGCGCCTGG
GAAAACATTC CGCTCCTTAG CTACCTGATG CTGCGCGGGC GCTGCCGGCG CTGCGGCCAT
GCGATCGGCA TCCGCTATCC GCTCGTCGAA CTCGCGTGCG CAGGGCTCGC GGCCGGCTCG
CTCGCGGCGT TCGGCCCGAC CGTCGCCGCG CTTGCCGCGT TCGCGCTGTG CGCGGCGCTG
CTCGCAATGA GCGCGATCGA CATCCGGACC GGCTATCTGC CCGACTCGAT GACGCTGCCA
CTGCTGTGGG CCGGGCTCGT GCTGAACCTC GGCGGCACTT TCACGTCGCT GCGCTCGGCC
GTGATCGGCG CGATGGCCGG CTACCTGTTC CTGTGGTCGA TCTACTGGCT GTTCAAATGG
CTGCGCGGCA TCGAGGGCAT CGGTTTCGGC GATCTGAAGC TGCTTGCCGC GCTCGGCGCA
TGGATGGGCT GGGCCGCACT GCCGCAAGTC GTGCTGTTCG CGGCGGTGAC CGGCGCGGTC
GTCGGGCTCG TCGCGACCTG GCGCGGCCGC ATGCGCTTCG AGGAGCCGAT TCCGTTCGGC
CCGTTCCTCG CGGCCGGCGG CGTCGCCACG CTGTTTTTCG GCACCCCTTT CTATGCGGCG
CTCGGAGGCT GA
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| Protein sequence | MTPAPLSAVS DSPASTLLAL AMLPPALQYA FAVVIGLCIG SFLNVVVHRL PVMMQRAWQA
EIAEATGAAG APPDDGYPPR YDLWRPRSAC PHCGHVLRAW ENIPLLSYLM LRGRCRRCGH
AIGIRYPLVE LACAGLAAGS LAAFGPTVAA LAAFALCAAL LAMSAIDIRT GYLPDSMTLP
LLWAGLVLNL GGTFTSLRSA VIGAMAGYLF LWSIYWLFKW LRGIEGIGFG DLKLLAALGA
WMGWAALPQV VLFAAVTGAV VGLVATWRGR MRFEEPIPFG PFLAAGGVAT LFFGTPFYAA
LGG
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