Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_0532 |
Symbol | ddl |
ID | 6122213 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | + |
Start bp | 586983 |
End bp | 587924 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641637094 |
Product | D-alanine--D-alanine ligase |
Protein accession | YP_001763832 |
Protein GI | 170731885 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.000500002 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.541798 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGGGA TCGATCCGAA ACGTTTCGGC AAGGTGGCGG TGTTGTTCGG CGGCGAATCC GCCGAGCGCG AGGTGTCGCT CACCTCGGGC CGCCTCGTGC TGCAGGGCCT GCGTGACGCG GGCGTCGACG CGCATCCGTT CGACCCGGCC GAGCGGCCGC TGTCGGCGCT GAAGGACGAA GGCTTCGTGC GCGCGTTCAA TGCGCTGCAC GGCGGCTACG GCGAGAACGG CCAGATCCAG GGCGCGCTCG ATTTCTACGG GATTCGCTAC ACGGGCAGCG GCGTGCTGGG CTCGGCGCTC GGCCTCGACA AGTTCCGCAC GAAGCTCGTG TGGCAGCAGA CGGGCGTGCC GACGCCGCCG TTCGAGACGG TGATGCGCGG CGACGATCTG GCCGCGCGCG CGACCGACAT CGTCGCGAAG CTCGGCCTGC CGCTGTTCGT GAAGCCGGCG AGCGAAGGCT CGAGCGTCGC GGTGCTGAAG GTGAAGACGG CCGACGCGCT GCCGGCCGCG CTCGCGGAAG CCGCGACGCA CGACAAGATC GTGATCGTCG AGAAGAGCAT CGAAGGCGGC GGCGAATATA CCGCGTGCAT CGCCGGCGAT CTCGACCTGC CGCTGATCAA GATCGTGCCG GCGGGCGAGT TCTACGACTA CCACGCGAAG TACGTCGCCG ACGATACGCA GTACCTGATC CCGTGCGGCC TGCCGGCGGA ACAGGAAGCG GAACTGAAGC GCATCGCGCG CCGCGCGTTC GCCGTGCTCG GCTGCACCGA CTGGGGCCGC GCGGATTTCA TGCTCGACGC GGCTGGCAAT GCGTATTTCC TCGAAGTGAA CACGGCCCCC GGGATGACCG ACCACTCGCT GCCGCCGAAG GCCGCGCGCG CGGTCGGCAT CGGCTATTCC GAGCTGGTCG TGAAGGTGCT GTCGCTCACG CTCAACGATT GA
|
Protein sequence | MSGIDPKRFG KVAVLFGGES AEREVSLTSG RLVLQGLRDA GVDAHPFDPA ERPLSALKDE GFVRAFNALH GGYGENGQIQ GALDFYGIRY TGSGVLGSAL GLDKFRTKLV WQQTGVPTPP FETVMRGDDL AARATDIVAK LGLPLFVKPA SEGSSVAVLK VKTADALPAA LAEAATHDKI VIVEKSIEGG GEYTACIAGD LDLPLIKIVP AGEFYDYHAK YVADDTQYLI PCGLPAEQEA ELKRIARRAF AVLGCTDWGR ADFMLDAAGN AYFLEVNTAP GMTDHSLPPK AARAVGIGYS ELVVKVLSLT LND
|
| |