| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_0450 |
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| Symbol | |
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| ID | 6122131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | + |
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| Start bp | 487981 |
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| End bp | 489081 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641637007 |
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| Product | type VI secretion protein |
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| Protein accession | YP_001763750 |
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| Protein GI | 170731803 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3520] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03347] type VI secretion protein, VC_A0111 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.969906 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGCCC CGAACCGGCG AATCGATCCT GGCGTAGTCG ACGCGCTGCT CGACGAGCCG
CACCGCTTCG AGTTCTTCCA GGCGGTGCGG GTGCTCGAAG GGCTGTTCGC GCGGCAGGCG
TCGGATGCGC CCGGCGCGTG GCGGCAGGGC GACGTGGTCG CGCAGCACAT CGCATTCCGC
AACACGCTGT CGCTCGGCTT CCCGCCGAGC GAGATCGAAG GCGCGCGTTC GTTCGACGAC
GACGGCGCGC CACTGAACTC GGACGACGAG CGCGACGCCG CGCTGGCCGC CGGCGAGCTC
GGCCGCGTCG AGCTGACGCC CGCGTTCTTC GGGCTGCTCG GCGGGCAGGG CGCGCTGCCG
CTGCACTACA CCGAGCAGAT CGTCGCGCGC GAGCACTTGC GGCGCGATCA CGCGGCGCGC
GCGTTCTTCG ACGTGTTCTC GAACCGCGCG ACCGCGCTGT TCTATGCGGC GTGGAAGAAA
TACCGGCTGC CGTTCCATTA CGAGCTCGAC CGCGACGAGC GCTACCTGCC GCTGTTGCTC
GCGATCGCGG GCGTGCCGAG CGACGAGGTG CGCGACAGCC TCGCGGCCGG CCCGGGCGGC
GTGCTCGACG AAGCCGTGGC CGGCTATGCG CTCGCGGCGC GGCACCGGCC GATGTCGGCC
GCGTACCTGC AGCGCACGCT GTCCGATTAC TTCCGCGTGC CGGTGAAGAT CGACCAGTTC
GTCGGCAAGT GGTACGACGT GCCGTCCGAT CAGCTGAGCG TGCTCGGCGA AGTCAACGCG
GTGCTCGGCG CGACGGCGCT CGTCGGCGAG CGCGTGTGGC AGCGCGACAT GCGCGCGCGG
ATCGTCGTCG GCCCGCTGTC CAAGCGCGAC TACGAAGCGT TCCTGCCCGG CGGCGCGCAC
GCCGTCGCGC TCGAGCGGAT GCTGACGCTG CTCGCCGGCG TCACGCTCGA GTACGAGGTG
AAGCTCGTGC TCAAGCGCAC CGAGGTCGGC GCGAGCGTGC TCGGCGCGGG CTCGCGGCTC
GGCTGGGATG CGTTCCTGTG CACGCGCGAT GCACTGGAGG ACCGCTCAGA CGCCCGCTAC
GAACTGCACG TGATTCACTG A
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| Protein sequence | MQAPNRRIDP GVVDALLDEP HRFEFFQAVR VLEGLFARQA SDAPGAWRQG DVVAQHIAFR
NTLSLGFPPS EIEGARSFDD DGAPLNSDDE RDAALAAGEL GRVELTPAFF GLLGGQGALP
LHYTEQIVAR EHLRRDHAAR AFFDVFSNRA TALFYAAWKK YRLPFHYELD RDERYLPLLL
AIAGVPSDEV RDSLAAGPGG VLDEAVAGYA LAARHRPMSA AYLQRTLSDY FRVPVKIDQF
VGKWYDVPSD QLSVLGEVNA VLGATALVGE RVWQRDMRAR IVVGPLSKRD YEAFLPGGAH
AVALERMLTL LAGVTLEYEV KLVLKRTEVG ASVLGAGSRL GWDAFLCTRD ALEDRSDARY
ELHVIH
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