Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_0450 |
Symbol | |
ID | 6122131 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | + |
Start bp | 487981 |
End bp | 489081 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641637007 |
Product | type VI secretion protein |
Protein accession | YP_001763750 |
Protein GI | 170731803 |
COG category | [S] Function unknown |
COG ID | [COG3520] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03347] type VI secretion protein, VC_A0111 family |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.969906 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGCCC CGAACCGGCG AATCGATCCT GGCGTAGTCG ACGCGCTGCT CGACGAGCCG CACCGCTTCG AGTTCTTCCA GGCGGTGCGG GTGCTCGAAG GGCTGTTCGC GCGGCAGGCG TCGGATGCGC CCGGCGCGTG GCGGCAGGGC GACGTGGTCG CGCAGCACAT CGCATTCCGC AACACGCTGT CGCTCGGCTT CCCGCCGAGC GAGATCGAAG GCGCGCGTTC GTTCGACGAC GACGGCGCGC CACTGAACTC GGACGACGAG CGCGACGCCG CGCTGGCCGC CGGCGAGCTC GGCCGCGTCG AGCTGACGCC CGCGTTCTTC GGGCTGCTCG GCGGGCAGGG CGCGCTGCCG CTGCACTACA CCGAGCAGAT CGTCGCGCGC GAGCACTTGC GGCGCGATCA CGCGGCGCGC GCGTTCTTCG ACGTGTTCTC GAACCGCGCG ACCGCGCTGT TCTATGCGGC GTGGAAGAAA TACCGGCTGC CGTTCCATTA CGAGCTCGAC CGCGACGAGC GCTACCTGCC GCTGTTGCTC GCGATCGCGG GCGTGCCGAG CGACGAGGTG CGCGACAGCC TCGCGGCCGG CCCGGGCGGC GTGCTCGACG AAGCCGTGGC CGGCTATGCG CTCGCGGCGC GGCACCGGCC GATGTCGGCC GCGTACCTGC AGCGCACGCT GTCCGATTAC TTCCGCGTGC CGGTGAAGAT CGACCAGTTC GTCGGCAAGT GGTACGACGT GCCGTCCGAT CAGCTGAGCG TGCTCGGCGA AGTCAACGCG GTGCTCGGCG CGACGGCGCT CGTCGGCGAG CGCGTGTGGC AGCGCGACAT GCGCGCGCGG ATCGTCGTCG GCCCGCTGTC CAAGCGCGAC TACGAAGCGT TCCTGCCCGG CGGCGCGCAC GCCGTCGCGC TCGAGCGGAT GCTGACGCTG CTCGCCGGCG TCACGCTCGA GTACGAGGTG AAGCTCGTGC TCAAGCGCAC CGAGGTCGGC GCGAGCGTGC TCGGCGCGGG CTCGCGGCTC GGCTGGGATG CGTTCCTGTG CACGCGCGAT GCACTGGAGG ACCGCTCAGA CGCCCGCTAC GAACTGCACG TGATTCACTG A
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Protein sequence | MQAPNRRIDP GVVDALLDEP HRFEFFQAVR VLEGLFARQA SDAPGAWRQG DVVAQHIAFR NTLSLGFPPS EIEGARSFDD DGAPLNSDDE RDAALAAGEL GRVELTPAFF GLLGGQGALP LHYTEQIVAR EHLRRDHAAR AFFDVFSNRA TALFYAAWKK YRLPFHYELD RDERYLPLLL AIAGVPSDEV RDSLAAGPGG VLDEAVAGYA LAARHRPMSA AYLQRTLSDY FRVPVKIDQF VGKWYDVPSD QLSVLGEVNA VLGATALVGE RVWQRDMRAR IVVGPLSKRD YEAFLPGGAH AVALERMLTL LAGVTLEYEV KLVLKRTEVG ASVLGAGSRL GWDAFLCTRD ALEDRSDARY ELHVIH
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