| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_0437 |
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| Symbol | |
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| ID | 6122118 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | + |
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| Start bp | 474702 |
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| End bp | 476498 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641636994 |
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| Product | YD repeat-containing protein |
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| Protein accession | YP_001763737 |
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| Protein GI | 170731790 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.161008 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATAAGGT CAGCTGAAGC GCATCGCGAG GAACGGTTTG CCTACGATCC GAGCGGCAGG
TTGATCGACG CGGTGAATCG GTACAGCCGC GTGCAGTTCT TCTTCGATCC GGTTGGCAAT
CTGGTGCGTG AACATCACGC CTACGATCTG TTCGGCGACC GGCGCAGCTA CGCGTGGCAT
CACGAATACG ATGAACTCGG CAATCGGCGG CGTACCGTTC GGCCGGACGG GCATGCGGTC
GACTGGCTGA TGTATGGCTC GGGGCATGTG CACGGGATGC TGCTCGACGG CGAGGAGCGT
GTGCAGTTCG AGCGCGATGA CTTGCATCGC GAGACGGTTC GTGTGCTGTC GAGCAAGGTC
GGGCAGCGCA CGCACTACGA TCGGGCCGGA CGCGTGTTGC AGCAGACGAT CCAGCGGTCG
ACGTCGCCCG CGCCGCTTGC CGAGCGGCGC TATCGCTATG ACGCGGTGGG GCGGTTGTCG
CGGATCGAGG ACAGCCGCAA GGGCGGGACC GACTATCGAT ACGATCCGGT CGGGCGTTTG
ATCGAGGCGA TCAGTCCCGT CGCGAAGGAG CGGTTCGCGT TCGATCCGGC GAGCAACATC
ATCGATCCGG TGCGGATTGC GGAGACGCCT GCATCGCGTC CGAGCCCGGT GCGGCCGGAA
AGCACGCTGC CGGTCGAGGT GCCGAAGGTG CTCGGGAACC TGCTGAAGGC GTACGCGGGA
ATGCACTTCG AGTACGACGC ACGCGGAAAT CTGGTGCGCA AGCGTACGCC GGCGGGTGAG
CAGGAATACG AGTGGGATGA ATTCAATCGC TTGCTGTCTG CGCGGGTTGC CGAGACGGCG
CGGCAGAGTC AGGCGCGGTA TTTCTATGAC GCGTTCGGTC GTCGTATTGC GAAGGAGGTG
AACGGCGAGC GGACGGTGTT CGGGTGGGAT GGCGACACGT TGGCGTACGA GAGTGATGGC
GAGCGTGGCA CGCATTATCT CTACGAGCCG GGGACGTTCG TGCCGCTGGC GCAGTATGTG
GCGGGGCCGG TTGAGGGGAT CGAGACGCCG GGGTGGAAGA GTACCGATCG CTATGTGCCG
GAGGAAGACC CGCTGCAGAA GGTGCCGGAG CGGCGGGGTG ATGCGGCGGT ATTCTATTAT
CACTGTGATC AGATCGGCAC GCCGCAGCTT CTAACGGACG ATGATGGCGA TGTGGTCTGG
GAAGCGTCGT ACAAGGCGTG GGGCGAAGCG CGGGAAGTGA TTGCGCGGGC CTCGAAGGCG
GCAGGGATTG TGGCGAGAAG TTTGCTGCGA TTCCAGGGGC AGCATTTTGA TGACGAAACA
GGACTGCATT ACAACCGGCA TCGTTACTAC GATCCGAGTT CGGGGCGTTT CGTATCGAAC
GATCCAATCG GTCTAGCCGG TGGCATCAAC GTCTTCCAGT ACGCGCCGAA TCCAATCACT
TGGATTGATC CACTTGGGTT GACCGGCACG TTCCCCTCGA ATCCAGATGA TATGACCAAA
GTCCTGGGTG TCGATCCTAA GATTGGCGCG ACGCCGGATG GAACGCCTCG ATATACGTGG
TTCCCGAACA GCAACACACG TATTCGCTAT GAAAGCCATC CAGAAGGGTT GTGTCCATGT
TCGCGGGGCT TCAATCCACG TCATCATGGC GCGCATTACC ATGTTGAAAC GAAGCCAGAT
GGTCTAAGCT GGGGCCAAGC CGCGCGTCGC GGAGCTATAA GCAAATCAAA ACCGGATGGT
TATACGCCAG GAAGTGGCAC TGGCTTTACT CCGGGAGAAA ATTTTCCGGG AGGGTAA
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| Protein sequence | MIRSAEAHRE ERFAYDPSGR LIDAVNRYSR VQFFFDPVGN LVREHHAYDL FGDRRSYAWH
HEYDELGNRR RTVRPDGHAV DWLMYGSGHV HGMLLDGEER VQFERDDLHR ETVRVLSSKV
GQRTHYDRAG RVLQQTIQRS TSPAPLAERR YRYDAVGRLS RIEDSRKGGT DYRYDPVGRL
IEAISPVAKE RFAFDPASNI IDPVRIAETP ASRPSPVRPE STLPVEVPKV LGNLLKAYAG
MHFEYDARGN LVRKRTPAGE QEYEWDEFNR LLSARVAETA RQSQARYFYD AFGRRIAKEV
NGERTVFGWD GDTLAYESDG ERGTHYLYEP GTFVPLAQYV AGPVEGIETP GWKSTDRYVP
EEDPLQKVPE RRGDAAVFYY HCDQIGTPQL LTDDDGDVVW EASYKAWGEA REVIARASKA
AGIVARSLLR FQGQHFDDET GLHYNRHRYY DPSSGRFVSN DPIGLAGGIN VFQYAPNPIT
WIDPLGLTGT FPSNPDDMTK VLGVDPKIGA TPDGTPRYTW FPNSNTRIRY ESHPEGLCPC
SRGFNPRHHG AHYHVETKPD GLSWGQAARR GAISKSKPDG YTPGSGTGFT PGENFPGG
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