Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_0427 |
Symbol | |
ID | 6122110 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | + |
Start bp | 460790 |
End bp | 461467 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641636986 |
Product | hypothetical protein |
Protein accession | YP_001763729 |
Protein GI | 170731782 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00124672 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0000000171383 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCCCTGA AGGAATATCA GGAATTAATC AAATCGAACC CGATGCAGAT TAATTTTTTT CGGCGTGCTT TTGCTGATAC GTACGACTGC TTTGTGGACG TATTTTACGA TGACCTAGAC CTCGTAGTGT CGCAGCTTGA ATCAAATCCG CAGCTCTATC GCGGCGACGG GGAGGATAAG TTGACCGGAA TCATTGTCGC CAATTTGACG CTGATGGGAT ATACCGCGAC TCATGGTACT ACTGGCGGAG GCGCCAAGGA CTTTACCGTA ATCGGAAGAA ATCCCACATG GTCGTGGATC GGTGAGGCCA AGATTTTCGA TAGCGTTACC AATTTGCGCG AAGGTTTTCT GCAACTAATT ACAAGATATA GAAATGTCAA CGCAACGAAG GCGCGAGGGG GGCTTCTCGC GTACACGTTT CGACCAAAGC CGGCGGCATT GCTAAAAGGA TGGATCGAAG AGGTTCAGAA GATGGGACTC GACAACTTTG AGATTGCGGA TTGCTCCAGG CGCCCCGGCC TCGCCTTTCA CTCCGAGCAC GAACACGAAG CCACTGGGCT TCCGTTCGAC GTCCGACATT TGGCTGTCGC TCTCTATTTC CAGCCGAAAG ACAAAAGCGG ACGAAAGGCG AAAAAATTTC AAGCTCCTGC GGCCAAGCCT GCGAACGCCG CGGCCTAA
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Protein sequence | MSLKEYQELI KSNPMQINFF RRAFADTYDC FVDVFYDDLD LVVSQLESNP QLYRGDGEDK LTGIIVANLT LMGYTATHGT TGGGAKDFTV IGRNPTWSWI GEAKIFDSVT NLREGFLQLI TRYRNVNATK ARGGLLAYTF RPKPAALLKG WIEEVQKMGL DNFEIADCSR RPGLAFHSEH EHEATGLPFD VRHLAVALYF QPKDKSGRKA KKFQAPAAKP ANAAA
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