Gene Bcenmc03_0427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_0427 
Symbol 
ID6122110 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp460790 
End bp461467 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content51% 
IMG OID641636986 
Producthypothetical protein 
Protein accessionYP_001763729 
Protein GI170731782 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00124672 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000171383 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCCTGA AGGAATATCA GGAATTAATC AAATCGAACC CGATGCAGAT TAATTTTTTT 
CGGCGTGCTT TTGCTGATAC GTACGACTGC TTTGTGGACG TATTTTACGA TGACCTAGAC
CTCGTAGTGT CGCAGCTTGA ATCAAATCCG CAGCTCTATC GCGGCGACGG GGAGGATAAG
TTGACCGGAA TCATTGTCGC CAATTTGACG CTGATGGGAT ATACCGCGAC TCATGGTACT
ACTGGCGGAG GCGCCAAGGA CTTTACCGTA ATCGGAAGAA ATCCCACATG GTCGTGGATC
GGTGAGGCCA AGATTTTCGA TAGCGTTACC AATTTGCGCG AAGGTTTTCT GCAACTAATT
ACAAGATATA GAAATGTCAA CGCAACGAAG GCGCGAGGGG GGCTTCTCGC GTACACGTTT
CGACCAAAGC CGGCGGCATT GCTAAAAGGA TGGATCGAAG AGGTTCAGAA GATGGGACTC
GACAACTTTG AGATTGCGGA TTGCTCCAGG CGCCCCGGCC TCGCCTTTCA CTCCGAGCAC
GAACACGAAG CCACTGGGCT TCCGTTCGAC GTCCGACATT TGGCTGTCGC TCTCTATTTC
CAGCCGAAAG ACAAAAGCGG ACGAAAGGCG AAAAAATTTC AAGCTCCTGC GGCCAAGCCT
GCGAACGCCG CGGCCTAA
 
Protein sequence
MSLKEYQELI KSNPMQINFF RRAFADTYDC FVDVFYDDLD LVVSQLESNP QLYRGDGEDK 
LTGIIVANLT LMGYTATHGT TGGGAKDFTV IGRNPTWSWI GEAKIFDSVT NLREGFLQLI
TRYRNVNATK ARGGLLAYTF RPKPAALLKG WIEEVQKMGL DNFEIADCSR RPGLAFHSEH
EHEATGLPFD VRHLAVALYF QPKDKSGRKA KKFQAPAAKP ANAAA