| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_0418 |
|---|
| Symbol | |
|---|
| ID | 6122101 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | - |
|---|
| Start bp | 452756 |
|---|
| End bp | 453961 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641636976 |
|---|
| Product | 2-alkenal reductase |
|---|
| Protein accession | YP_001763720 |
|---|
| Protein GI | 170731773 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
|---|
| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family
[TIGR02038] periplasmic serine pepetdase DegS |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.00163437 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCTTAGAC GCTTCTGGCT GTTCTTCGCG CAGGCGGTGA CCGTACTGCT CGCGCTGATG
TTCATCGTCG TGACGCTCAA GCCGCAATGG CTGCAACGGC AAGGACAGCT CGGCAAGCAG
CTCGCCACGC CGATCGTCGC GCTGCGGGAA GTCGCGCCGG GCATCGGCGG CGCACCGGCG
ACCACGTCGT ACGCCGAAGC CGCGCAGAAG GCGATGCCGG CCGTCGTCAA CGTGTTCTCC
AGCAAGGACG GCTCGCTGCC GCCCGATCCG CGCGCGAAAG ATCCGCTGTT CCGTTACTTC
TTCGGCGACC GCAACGCCCG CAAGCAGCAG GACGAGCCGG CCGCCAACCT CGGCTCGGGC
GTTATCGTGA GCCCTGAAGG TTACATTCTA ACGAACCAGC ACGTCGTGGA CGGCGCCGAC
CAGATCGAAG TCGCGCTCGC CGACGGCCGC ACGGCCACCG CGAAGGTGAT CGGCAGCGAT
CCCGAAACCG ATCTCGCGGT GCTGAAGATC AACATGACGA ACCTGCCGAC GATCACGCTC
GGCCGTTCCG ACCAGTCGCG CGTCGGCGAC GTCGTGCTCG CGATCGGCAA TCCGTTCGGC
GTCGGCCAGA CGGTCACGAT GGGGATCATC AGCGCGCTCG GCCGCAACCA CCTCGGCATC
AACACGTTCG AGAACTTCAT CCAGACCGAT GCGCCGATCA ACCCCGGCAA CTCCGGCGGC
GCGCTGGTCG ACGTGAACGG CAACCTGCTC GGCATCAACA CGGCGATCTA CTCGCGCTCC
GGCGGCTCGC TCGGCATCGG TTTCGCGATT CCCGTCTCGA CCGCCCGCAC GGTGCTCGAA
AGCATCATCA CGACGGGCTC GGTCACGCGC GGCTGGATCG GCGTCGAGCC GCAGGACGTC
ACGCCGGAAA TCGCCGAGTC GTTCGGGCTG CAACAGAAAT CGGGCGCGAT CGTCGCGGGC
GTGCTGCAGG GCGGGCCGGC CGACAAGGCC GGCATCAAGC CGGGCGACAT CCTGGTGAGC
GTGAACGGCG ACGAAATCAC CGACACGACG AAGCTGCTGA ACACCGTCGC GCAGATCAAG
CCGGGCACGC CGACCAAGGT GCACGTCGTA CGCAAGGGCA AGCAGTTCGA CGTGAACGTC
GTGATCGGCA AGCGCCCGCC GCCGCCGAAG CAGGCGCTCG ACGAGCAGGA CAACGATAGC
GAATGA
|
|---|
| Protein sequence | MLRRFWLFFA QAVTVLLALM FIVVTLKPQW LQRQGQLGKQ LATPIVALRE VAPGIGGAPA
TTSYAEAAQK AMPAVVNVFS SKDGSLPPDP RAKDPLFRYF FGDRNARKQQ DEPAANLGSG
VIVSPEGYIL TNQHVVDGAD QIEVALADGR TATAKVIGSD PETDLAVLKI NMTNLPTITL
GRSDQSRVGD VVLAIGNPFG VGQTVTMGII SALGRNHLGI NTFENFIQTD APINPGNSGG
ALVDVNGNLL GINTAIYSRS GGSLGIGFAI PVSTARTVLE SIITTGSVTR GWIGVEPQDV
TPEIAESFGL QQKSGAIVAG VLQGGPADKA GIKPGDILVS VNGDEITDTT KLLNTVAQIK
PGTPTKVHVV RKGKQFDVNV VIGKRPPPPK QALDEQDNDS E
|
|---|
| |