Gene Bcenmc03_0379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_0379 
Symbol 
ID6122062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp414449 
End bp415180 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content63% 
IMG OID641636937 
ProductOmpW family protein 
Protein accessionYP_001763681 
Protein GI170731734 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3047] Outer membrane protein W 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.736449 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGAA AACTGGCCAT TACGGGGGCC GCAGCGCTCG CATTCACGTT CGCGGGCAGT 
ACGGCACAAG CACAATCCGC AGGTGATTTC TACGTCAGCA CCGGCTGGCT GCACCTTTCG
CCGCAGGACA GCAGTGACCC GCTGTTCGTC TACCGCGTAG GCGGCACGCC CATCAACCAA
TCGATTCCCA ACACCGGCGC CGGCATCAAC GACGCCGACA CGCTGGGGCT CGCAGCAGGC
TACTTCGTCA CCGACCATAT CTCCACCGAG CTCGTGATGG GGATCCCGCC GAAGTTCGAC
ATCACCGGCA AGGGTCAGTT CGACAGATTC GGCGTACTCG GTCGTGCATA CCAGTGGAGC
CCGGCCGTCT TGCTTCGCTA CCACTTCAAC GACGCCAATG CGAAGTTCCG TCCGTATGTC
GGCGTCGGTG CGACGTACGT CTGGTTCACC GGCGCCAAGA TCACCAACAG CGCGTTCGAG
AACGGCGTGC TCGGCGGCCC GACCAGCGCG ACGACCAGCA ACCAGTGGGC GCCCGTGCTC
AACGCCGGCT TCACGTACAA CTTCACGAAA CACTGGTTCG CAGGCCTGTC GCTGTCGTAC
ATCCCGGTCA GCGTGACCGC GACGTTCACG ACGGCCCGCC GGACGCCGGT CGGGACGCTG
ACGGAAACGT CGAAGGCCCA CATCTCGCTG AACCCGATCG TCACGTACCT GAACCTCGGC
TACCGCTTCT AA
 
Protein sequence
MKRKLAITGA AALAFTFAGS TAQAQSAGDF YVSTGWLHLS PQDSSDPLFV YRVGGTPINQ 
SIPNTGAGIN DADTLGLAAG YFVTDHISTE LVMGIPPKFD ITGKGQFDRF GVLGRAYQWS
PAVLLRYHFN DANAKFRPYV GVGATYVWFT GAKITNSAFE NGVLGGPTSA TTSNQWAPVL
NAGFTYNFTK HWFAGLSLSY IPVSVTATFT TARRTPVGTL TETSKAHISL NPIVTYLNLG
YRF