Gene Bcenmc03_0325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_0325 
Symbol 
ID6122008 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp371815 
End bp373005 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content62% 
IMG OID641636883 
Productelongation factor Tu 
Protein accessionYP_001763627 
Protein GI170731680 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0050] GTPases - translation elongation factors 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0223104 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0648127 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAAG GTAAATTTGA GCGGACCAAG CCGCACGTGA ACGTTGGTAC GATTGGTCAC 
GTTGACCACG GCAAGACGAC GCTGACGGCA GCGATCACGA CGGTGCTGAC GAAGAAGTTC
GGCGGCGAAG CGAAGGCATA CGACCAGATC GACGCGGCAC CGGAAGAAAA GGCGCGCGGC
ATCACGATCA ACACGGCACA CGTCGAGTAC GAAACGGCTA ACCGCCACTA CGCACACGTC
GACTGCCCGG GCCACGCTGA CTATGTGAAG AACATGATCA CGGGCGCAGC GCAGATGGAC
GGCGCGATCC TGGTTTGCTC GGCAGCAGAC GGCCCGATGC CGCAAACGCG TGAGCACATC
CTGCTGGCGC GTCAGGTTGG CGTTCCGTAC ATCATCGTGT TCCTGAACAA GTGCGACATG
GTTGACGACG CGGAACTGCT CGAGCTGGTC GAGATGGAAG TTCGCGAACT CCTGTCGAAG
TACGACTTCC CGGGCGACGA CACGCCGATC GTGAAGGGTT CGGCGAAGCT GGCGCTGGAA
GGCGACACGG GCGAGCTGGG CGAAGTGGCG ATCATGAGCC TGGCCGACGC GCTGGACACG
TACATCCCGA CGCCGGAGCG TGCAGTTGAC GGCGCGTTCC TGATGCCGGT GGAAGACGTG
TTCTCGATCT CGGGCCGCGG TACGGTGGTG ACGGGTCGTG TCGAGCGCGG CATCGTGAAG
GTCGGCGAGG AAATCGAAAT CGTCGGTATC AAGCCGACGG TGAAGACGAC CTGCACGGGC
GTTGAAATGT TCCGCAAGCT GCTGGACCAA GGTCAGGCAG GCGACAACGT GGGTATCCTG
CTGCGCGGCA CGAAGCGTGA AGACGTGGAG CGTGGCCAGG TTCTGGCGAA GCCGGGTTCG
ATCACGCCGC ACACGCACTT CACGGCTGAA GTGTACGTGC TGAGCAAGGA CGAAGGCGGC
CGTCACACGC CGTTCTTCAA CAACTACCGT CCGCAGTTCT ACTTCCGTAC GACGGACGTG
ACGGGCTCGA TCGAGCTGCC GAAGGACAAG GAAATGGTGA TGCCGGGCGA CAATGTGTCG
ATCACGGTGA AGCTGATCGC TCCGATCGCG ATGGAAGAAG GTCTGCGCTT CGCGATCCGC
GAAGGCGGCC GTACCGTCGG CGCCGGCGTC GTCGCCAAGA TCATCGAGTA A
 
Protein sequence
MAKGKFERTK PHVNVGTIGH VDHGKTTLTA AITTVLTKKF GGEAKAYDQI DAAPEEKARG 
ITINTAHVEY ETANRHYAHV DCPGHADYVK NMITGAAQMD GAILVCSAAD GPMPQTREHI
LLARQVGVPY IIVFLNKCDM VDDAELLELV EMEVRELLSK YDFPGDDTPI VKGSAKLALE
GDTGELGEVA IMSLADALDT YIPTPERAVD GAFLMPVEDV FSISGRGTVV TGRVERGIVK
VGEEIEIVGI KPTVKTTCTG VEMFRKLLDQ GQAGDNVGIL LRGTKREDVE RGQVLAKPGS
ITPHTHFTAE VYVLSKDEGG RHTPFFNNYR PQFYFRTTDV TGSIELPKDK EMVMPGDNVS
ITVKLIAPIA MEEGLRFAIR EGGRTVGAGV VAKIIE