Gene Bcenmc03_0301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_0301 
Symbol 
ID6121984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand- 
Start bp334724 
End bp335821 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content63% 
IMG OID641636850 
Product4-hydroxyphenylpyruvate dioxygenase 
Protein accessionYP_001763603 
Protein GI170731656 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins 
TIGRFAM ID[TIGR01263] 4-hydroxyphenylpyruvate dioxygenase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones8 
Fosmid unclonability p-value0.000140026 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAGATCC CCACCTGGGA CAATCCCGTC GGCACCGACG GTTTCGAATT CATCGAATAC 
ACGGCACCGG ACCCGAAAGC ACTCGGACAA TTGTTCGAAC GGATGGGTTT CACCGCGATC 
GCGCGCCATC GCCACAAGGA CGTGACGGTG TACCGCCAGG GCGACATCAA CTTCATCATC 
AACGCCGAAC CCGATTCGTT CGCGCAACGC TTCGCGCGGC TGCACGGCCC GTCGATCTGC 
GCGATCGCGT TCCGCGTGCA GGACGCGGCA AAGGCGTACC AGCGCGCGCT CGAACTCGGC 
GCATGGGGCT TCGACAACAA GACGGGCCCG ATGGAGCTGA ACATCCCGGC GATCAAGGGC 
ATCGGCGATT CGCTGATCTA TTTCGTCGAC CGCTGGCGCG GCAAGAACGG CGCGCAGCCG 
GGCGCGATCG GCGACATCAG CATCTACGAC GTCGACTTCG AGCCGATTGC CGGCGCGAAC 
CCGAATCCGG TCGGCCACGG CCTCACCTAC ATCGACCACC TGACGCACAA CGTGCATCGC 
GGCCGCATGC AGGAATGGGC CGAGTTCTAC GAGCGCCTGT TCAACTTCCG CGAAGTGCGC 
TACTTCGACA TCGAAGGCAA GGTGACGGGC GTGAAATCGA AGGCAATGAC GTCGCCGTGC 
GGCAAGATCC GCATCCCGAT CAACGAGGAA GGCTCGGACA CGGCCGGCCA GATCCAGGAG 
TACCTGGACG CGTATCACGG CGAAGGCATC CAGCACATCG CGCTCGGCGC GAGCGACATC 
TACCAGGCGG TCGACGGGCT GCGCAGCAAG GAAGTGAAGC TGCTCGACAC GATCGACACG 
TATTACGAGC TGGTCGACCG CCGCGTGCCG AACCACGGCG AATCGCTGGA CGAGCTGAAG 
AAGCGCAAGA TCCTGATCGA CGGCGCGCGC GACGACCTGC TGCTGCAGAT CTTCACCGAG 
AACCAGATCG GCCCGATCTT CTTCGAGATC ATCCAGCGCA AGGGCAACCA GGGCTTCGGC 
GAAGGCAACT TCAAGGCGCT GTTCGAATCG ATCGAGCTCG ACCAGATCCG TCGCGGCGTC 
GTGCAGGACA AGGCCTGA
 
Protein sequence
MQIPTWDNPV GTDGFEFIEY TAPDPKALGQ LFERMGFTAI ARHRHKDVTV YRQGDINFII 
NAEPDSFAQR FARLHGPSIC AIAFRVQDAA KAYQRALELG AWGFDNKTGP MELNIPAIKG 
IGDSLIYFVD RWRGKNGAQP GAIGDISIYD VDFEPIAGAN PNPVGHGLTY IDHLTHNVHR 
GRMQEWAEFY ERLFNFREVR YFDIEGKVTG VKSKAMTSPC GKIRIPINEE GSDTAGQIQE 
YLDAYHGEGI QHIALGASDI YQAVDGLRSK EVKLLDTIDT YYELVDRRVP NHGESLDELK 
KRKILIDGAR DDLLLQIFTE NQIGPIFFEI IQRKGNQGFG EGNFKALFES IELDQIRRGV 
VQDKA