Gene Bcenmc03_0289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_0289 
Symbol 
ID6121972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp317548 
End bp318831 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content75% 
IMG OID641636838 
Productmajor facilitator transporter 
Protein accessionYP_001763591 
Protein GI170731644 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.69004e-05 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value5.14998e-11 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAACTGCC CTGCCAACCG TTGCTCCGCC CCCGTTTCGC CCGCCGTCGC GGCGCCGCCC 
GCACTGAGCA CGGGCATGAC GCTGTTCTTC GCCGCGACGG TCGGCGTGAT CGTGATGGAC
CTGTTCGCCG CGCAGCCGCT GACCGGCCCG ATCAGCGCGG ACCTGCACCT GCCGCCCGGT
CTCGCCGGCC TCGTCGCGAT GCTGCCGCAG CTCGGCTACG CGGCCGGGCT CGCGTTGCTC
GTGCCGCTGG TCGACCTGCT CGAGAACCGG CGCCTGATCG TCGCGACGCT CGCCGTCTGC
GCGGCGGCGC TCGCGCTGCC CGCCTTCACG CAGTCGGGCG CCGTGTTCCT GCTTGCAACG
CTCGCGGCCG GCGCCGCGTC GAGCGTGATC CAGATGCTGG TGCCGATGGC CGCGTCGATG
GCGCCCGAAG CGCAGCGCGG CCGCGCGGTC GGCAACGTGA TGAGCGGGCT GATGCTCGGC
ATCCTGCTGT CGCGGCCGCT CGCGAGCCTG ATCGCGGGCT CGGCCGGCTG GCGGGCGTTC
TATCTGCTGG CCGCGCTCGC GGACGCGGCG ATCGCCGTCG TGCTCGCGCT GCGCCTGCCG
GCGCGCACGC CGTCGATCAC CGCCAGCTAC CGCGCATTGC TCGCGTCGAT GGGACGCCTG
CTTGCCGACG AGCCGGTGCT GCGCCGGCAT GCACTGTCGG CCGCGCTCGC GATGGCCGCG
TTCAGCGCGT TCTGGACCGC CGTCGGGCTG CGGCTCGCGC AACCGCCGTT CGCGCTCGAC
CTGCACGGCA TTGCGCTGTT CGCGTTCGCC GGCGCGAGCG GCGCGATCGT CACGCCGCTC
GCCGGCCGCG CGGGCGACCG CGGCCACGGC CCGGCCGCGC AACGGCTCGC GCACGGCACG
ATGCTCGCGG CGCTCGTCGT GCTCGGCGTC GCCGGCGCCG GCTGGTTCGG TTTCGATGCG
CATACGCATC GCGGCGTCGC GCTCGCGCTG CTGGCCGGCG GCGCGGCGCT GCTCGATGCG
GGCGTCATCG TCGACCAGAC GATCGGCCGC CGCGCGATCA ACCTGCTGAA CCCGGCCGCG
CGCGGACGCC TGAACGGACT GTTCGTCGGA CTGTTCTTCG TCGGCGGCGC GCTGGGTGCG
GCGCTCGCGG GCAGTGCATG GGCCTGGGGC GGCTGGAGCG CGGTGTGTGG TGTCGGGTTC
GCATTCGCCG GTGCGGCGGC CGTGTTCGGG CTGATGGCCG GCCGCGGAGC CGGCGCGGCG
GCGTGGGATC GGCCGGGTGC GTGA
 
Protein sequence
MNCPANRCSA PVSPAVAAPP ALSTGMTLFF AATVGVIVMD LFAAQPLTGP ISADLHLPPG 
LAGLVAMLPQ LGYAAGLALL VPLVDLLENR RLIVATLAVC AAALALPAFT QSGAVFLLAT
LAAGAASSVI QMLVPMAASM APEAQRGRAV GNVMSGLMLG ILLSRPLASL IAGSAGWRAF
YLLAALADAA IAVVLALRLP ARTPSITASY RALLASMGRL LADEPVLRRH ALSAALAMAA
FSAFWTAVGL RLAQPPFALD LHGIALFAFA GASGAIVTPL AGRAGDRGHG PAAQRLAHGT
MLAALVVLGV AGAGWFGFDA HTHRGVALAL LAGGAALLDA GVIVDQTIGR RAINLLNPAA
RGRLNGLFVG LFFVGGALGA ALAGSAWAWG GWSAVCGVGF AFAGAAAVFG LMAGRGAGAA
AWDRPGA