Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_0276 |
Symbol | |
ID | 6121959 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | - |
Start bp | 303918 |
End bp | 305315 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641636825 |
Product | glucarate dehydratase |
Protein accession | YP_001763578 |
Protein GI | 170731631 |
COG category | [M] Cell wall/membrane/envelope biogenesis [R] General function prediction only |
COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
TIGRFAM ID | [TIGR03247] glucarate dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00815006 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCCGAAC CCAGCCGTGC CGGCACCCCA CGCGTCACGC GGATGCAGGT GATTCCTGTC GCCGGCCGCG ACAGCATGCT GCTCAACCTG TGCGGCGCGC ACGCGCCGCA CTTCACGCGC AACCTCGTGA TCCTCGACGA CAGCAGCGGA CACACGGGCG TCGGCGAAGT GCCGGGCGGC GAAGGCATCC GCCATGCGCT CGAACGCATG ACGGATCTCG TCGTCGGCCA GTCGATCGGG CGCTACCAGG CGACGCTCAA CGCGGTGCGC GCGGCGCTGT CCGGCGCGGG CGCCGGTGCC GGCCGCACGA TCCGCCACGA AGTGACGTCG GCCGGCGAGG CGGCGGTGCT GCGCCAGCCG CACGAGATCA ACCTGCGGCT CGACAACGTG ATCACCGCGA TCGAAGCTGC ATTGCTCGAC CTGCTCGGCC AGCACCTCGA CGTACCGGTC GCGGCACTGC TCGGCGAAGG CCAGCAGCGC GACGCGGTGC CGATGCTCGC GTATTTGTTC TACATCGGCG ACCGGCGCCG CACCGATCTG CCGTATCGCG ACGAGGCGCA GGCGCGCGCC CCGTGGTTCC GGCTGCGCAA CGAGGCGGCG CTCACGCCGG CCGAGATCGC GCGACAGGCC GAAGCCGCGG TCGAGCGCTA CGGTTTCGCC GATTTCAAGC TGAAGGGCGG CGTGATGGCC GGCGCCGACG AGATGGAAGC GATCGCGGCG ATCAAGACGC GCTTTCCCGA CGCGCGCGCG ACGCTCGACC CGAACGGCGC GTGGTCGCTC GACGAAGCCG TCGCGCTGTG CCGCGGGCAA GGCCACCTGC TCGCGTATGC GGAAGATCCG TGCGGGCCGG AAGCCGGCTA TTCGGGCCGC GAGGTGATGG CCGAATTCCG CCGCTCGACG GGCATCCCGA CCGCGACCAA CATGATCGCG ACCGACTGGC GGCAGATGGA TCATGCGGTG CGGCTGCAGG CGGTCGACAT CCCGCTCGCC GATCCGCATT TCTGGACGAT GCAGGGCTCG GTGCGGCTCG CGCAGCTGTG TCGCGACTGG GGGCTCACGT GGGGTTCGCA CTCGAACAAT CACTTCGACG TGTCGCTCGC GATGTTCACG CATGCGGCGG CGGCCGCGCC CGGCACGATC ACCGCGATCG ACACGCACTG GATCTGGCAG GAAGGCGACG CGCGGCTCAC GCGCGAACCG CTCGCGATCG TCGGCGGCAA GGTGGCCGTG CCGGAACGGC CGGGGCTCGG GATCGAGATC GACATGACGC AGGTCGAGGC CGCGCATGCG CTGTACAACG CGGTGGATGG TACGGCGCGC GACGATGCGG TCGCGATGCG GTATCTGGTG CCGGGGTGGA CGTATGATCC GAAGCGGCCG AGTTTGGGGC GGGTTTAG
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Protein sequence | MSEPSRAGTP RVTRMQVIPV AGRDSMLLNL CGAHAPHFTR NLVILDDSSG HTGVGEVPGG EGIRHALERM TDLVVGQSIG RYQATLNAVR AALSGAGAGA GRTIRHEVTS AGEAAVLRQP HEINLRLDNV ITAIEAALLD LLGQHLDVPV AALLGEGQQR DAVPMLAYLF YIGDRRRTDL PYRDEAQARA PWFRLRNEAA LTPAEIARQA EAAVERYGFA DFKLKGGVMA GADEMEAIAA IKTRFPDARA TLDPNGAWSL DEAVALCRGQ GHLLAYAEDP CGPEAGYSGR EVMAEFRRST GIPTATNMIA TDWRQMDHAV RLQAVDIPLA DPHFWTMQGS VRLAQLCRDW GLTWGSHSNN HFDVSLAMFT HAAAAAPGTI TAIDTHWIWQ EGDARLTREP LAIVGGKVAV PERPGLGIEI DMTQVEAAHA LYNAVDGTAR DDAVAMRYLV PGWTYDPKRP SLGRV
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