Gene Bcenmc03_0276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_0276 
Symbol 
ID6121959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp303918 
End bp305315 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content70% 
IMG OID641636825 
Productglucarate dehydratase 
Protein accessionYP_001763578 
Protein GI170731631 
COG category[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only 
COG ID[COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 
TIGRFAM ID[TIGR03247] glucarate dehydratase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00815006 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCGAAC CCAGCCGTGC CGGCACCCCA CGCGTCACGC GGATGCAGGT GATTCCTGTC 
GCCGGCCGCG ACAGCATGCT GCTCAACCTG TGCGGCGCGC ACGCGCCGCA CTTCACGCGC
AACCTCGTGA TCCTCGACGA CAGCAGCGGA CACACGGGCG TCGGCGAAGT GCCGGGCGGC
GAAGGCATCC GCCATGCGCT CGAACGCATG ACGGATCTCG TCGTCGGCCA GTCGATCGGG
CGCTACCAGG CGACGCTCAA CGCGGTGCGC GCGGCGCTGT CCGGCGCGGG CGCCGGTGCC
GGCCGCACGA TCCGCCACGA AGTGACGTCG GCCGGCGAGG CGGCGGTGCT GCGCCAGCCG
CACGAGATCA ACCTGCGGCT CGACAACGTG ATCACCGCGA TCGAAGCTGC ATTGCTCGAC
CTGCTCGGCC AGCACCTCGA CGTACCGGTC GCGGCACTGC TCGGCGAAGG CCAGCAGCGC
GACGCGGTGC CGATGCTCGC GTATTTGTTC TACATCGGCG ACCGGCGCCG CACCGATCTG
CCGTATCGCG ACGAGGCGCA GGCGCGCGCC CCGTGGTTCC GGCTGCGCAA CGAGGCGGCG
CTCACGCCGG CCGAGATCGC GCGACAGGCC GAAGCCGCGG TCGAGCGCTA CGGTTTCGCC
GATTTCAAGC TGAAGGGCGG CGTGATGGCC GGCGCCGACG AGATGGAAGC GATCGCGGCG
ATCAAGACGC GCTTTCCCGA CGCGCGCGCG ACGCTCGACC CGAACGGCGC GTGGTCGCTC
GACGAAGCCG TCGCGCTGTG CCGCGGGCAA GGCCACCTGC TCGCGTATGC GGAAGATCCG
TGCGGGCCGG AAGCCGGCTA TTCGGGCCGC GAGGTGATGG CCGAATTCCG CCGCTCGACG
GGCATCCCGA CCGCGACCAA CATGATCGCG ACCGACTGGC GGCAGATGGA TCATGCGGTG
CGGCTGCAGG CGGTCGACAT CCCGCTCGCC GATCCGCATT TCTGGACGAT GCAGGGCTCG
GTGCGGCTCG CGCAGCTGTG TCGCGACTGG GGGCTCACGT GGGGTTCGCA CTCGAACAAT
CACTTCGACG TGTCGCTCGC GATGTTCACG CATGCGGCGG CGGCCGCGCC CGGCACGATC
ACCGCGATCG ACACGCACTG GATCTGGCAG GAAGGCGACG CGCGGCTCAC GCGCGAACCG
CTCGCGATCG TCGGCGGCAA GGTGGCCGTG CCGGAACGGC CGGGGCTCGG GATCGAGATC
GACATGACGC AGGTCGAGGC CGCGCATGCG CTGTACAACG CGGTGGATGG TACGGCGCGC
GACGATGCGG TCGCGATGCG GTATCTGGTG CCGGGGTGGA CGTATGATCC GAAGCGGCCG
AGTTTGGGGC GGGTTTAG
 
Protein sequence
MSEPSRAGTP RVTRMQVIPV AGRDSMLLNL CGAHAPHFTR NLVILDDSSG HTGVGEVPGG 
EGIRHALERM TDLVVGQSIG RYQATLNAVR AALSGAGAGA GRTIRHEVTS AGEAAVLRQP
HEINLRLDNV ITAIEAALLD LLGQHLDVPV AALLGEGQQR DAVPMLAYLF YIGDRRRTDL
PYRDEAQARA PWFRLRNEAA LTPAEIARQA EAAVERYGFA DFKLKGGVMA GADEMEAIAA
IKTRFPDARA TLDPNGAWSL DEAVALCRGQ GHLLAYAEDP CGPEAGYSGR EVMAEFRRST
GIPTATNMIA TDWRQMDHAV RLQAVDIPLA DPHFWTMQGS VRLAQLCRDW GLTWGSHSNN
HFDVSLAMFT HAAAAAPGTI TAIDTHWIWQ EGDARLTREP LAIVGGKVAV PERPGLGIEI
DMTQVEAAHA LYNAVDGTAR DDAVAMRYLV PGWTYDPKRP SLGRV