Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_0253 |
Symbol | fliA |
ID | 6121936 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | + |
Start bp | 281706 |
End bp | 282437 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641636801 |
Product | flagellar biosynthesis sigma factor |
Protein accession | YP_001763555 |
Protein GI | 170731608 |
COG category | [K] Transcription |
COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.910548 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACAACG CTCAAGGAAA GATGTCCCAG GCCGACGTGC TCGCGCAATA CGCGCCGCTC GTGCGCCGCC TCGGGCTGCA GCTCGTCGCG AAGATGCCGG CGAGCGTCGA TCTCGACGAC CTGATCCAGG CCGGCATGAT CGGCCTGATG GACGCGGCCG GCCGCTACAA GGAGGACCAG GGCGCGCAGT TCGAGACCTA CGCGACGCAG CGCATCCGCG GCGCGATGCT CGACGAGCTG CGCAGCAACG ACTGGCTGCC GCGCAGCCTG CGCAAGACGT CGCGCGAGGT CGAGCACGCG GTGCACCAGG TCGAGCAGCA CCTCGGCCGC TCGGCGAGCG AGACCGAGAT CGCGCAGCAC CTGAACATGC CGCTCGACGA ATACCAGGGG ATGCTGCAGG ACCTGCACGG CAGCCAGCTC ATCTATTACG AGGATTTCGA CCGCGCGGCC GACGACGAGC CGTTCCTCGA CCGTTATCGC GTCGATCACG CCGATCCGTT GTCGGCGCTC CTCGACGACC ACCTGCGCGA GGCGCTCGTC GAGGCGATCG AGCGGCTGCC GGAGCGCGAG AAGCTGCTGA TGTCGCTGTA CTACGAACGG GGTCTGAATC TGCGCGAGAT CGGCGCGGTG CTCGAAGTGA GCGAATCGCG CGTGTGCCAG CTGCACAGCC AGGCCGTCGC CCGCCTGCGC GCGCGGCTGC GCGAGCAGGC GTGGGTCGGC GCGGAGTCCT GA
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Protein sequence | MYNAQGKMSQ ADVLAQYAPL VRRLGLQLVA KMPASVDLDD LIQAGMIGLM DAAGRYKEDQ GAQFETYATQ RIRGAMLDEL RSNDWLPRSL RKTSREVEHA VHQVEQHLGR SASETEIAQH LNMPLDEYQG MLQDLHGSQL IYYEDFDRAA DDEPFLDRYR VDHADPLSAL LDDHLREALV EAIERLPERE KLLMSLYYER GLNLREIGAV LEVSESRVCQ LHSQAVARLR ARLREQAWVG AES
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