| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_0229 |
|---|
| Symbol | |
|---|
| ID | 6121912 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | + |
|---|
| Start bp | 256273 |
|---|
| End bp | 257097 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641636777 |
|---|
| Product | Cof-like hydrolase |
|---|
| Protein accession | YP_001763531 |
|---|
| Protein GI | 170731584 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
|---|
| TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACAAAG TCATCGCCAC CGATCTCGAC GGTACGCTGC TGAACAGCGA CCACCAGCTC
GACCCGTACA CGATCGACAC CGTTCGCCGG CTCGACCGCG ACGGCGTGCA GTTCGTGATC
GCCACGGGGC GCCACTATGC GGACGTCGCC GGCATTCGCG ACGTGCTCGG CATCCGGCCG
TACCTGATCA CGTCGAACGG CGCGCGCGTG CATGCGCCGG ACGACACGAA GATCCACGCG
CAGGACATCG ACGCAGCGAT CGTGCGCAGC CTCGTGCAGC CGGCAGTCGT CGGCGCGCAC
GGCCGCGTGA TCGTCAACCT GTTCACTAAC GACGGCTGGC TGATCGACCG CGACGCGCCG
CACCTGCTCG AATTCCATCA GGATTCGGGC TTCCGGTACG ACGTGATCGA CATGGCCGCG
CACGACGGCG CGGATATCGC GAAGGTGCTG TATATCGGCG AACCGGCCGA CCTGGCGGTC
GTCGCGGAGC AGATGCGTGT GCAGTTCGGC GACGCGCTGT ACGTCACGTA CTCGCTGCCC
GACTGCCTCG AAGTGATGAC CGCGAACGTG TCGAAGGGGC GCGCGCTGCG CGCGGTGCTC
GCGCGGCTCG GCGTCGATGC CGGCCACTGC ATCGCGTTCG GCGACAACAT GAACGACATC
GATCTGCTCG AAACCGCCGG TCATGCGTTC ATGATGAACA ACGCGAACCC CGACCTGATC
GCGCGGCTGC CGCACGTCCC GCGGATCGGC AACAACTTCG ACGCGGGCGT CGCCCGCCAT
CTGCGCACGC TGTTCTCGCT GGAAGACGAC GTCGTCGCGT CCTGA
|
|---|
| Protein sequence | MYKVIATDLD GTLLNSDHQL DPYTIDTVRR LDRDGVQFVI ATGRHYADVA GIRDVLGIRP
YLITSNGARV HAPDDTKIHA QDIDAAIVRS LVQPAVVGAH GRVIVNLFTN DGWLIDRDAP
HLLEFHQDSG FRYDVIDMAA HDGADIAKVL YIGEPADLAV VAEQMRVQFG DALYVTYSLP
DCLEVMTANV SKGRALRAVL ARLGVDAGHC IAFGDNMNDI DLLETAGHAF MMNNANPDLI
ARLPHVPRIG NNFDAGVARH LRTLFSLEDD VVAS
|
|---|
| |