| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_0152 |
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| Symbol | |
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| ID | 6121835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | - |
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| Start bp | 181482 |
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| End bp | 183185 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641636699 |
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| Product | thiamine pyrophosphate protein |
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| Protein accession | YP_001763454 |
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| Protein GI | 170731507 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCATT CCAAGGATCT CGAGCCGCGC GCCACCACCG GTGCGCGACT GCTCGTCGAT
GCGTTGCTCG CCAATCACGT CGAACGCGTG TTCTGCGTGC CGGGCGAGAG CTTCCTCGCC
GTGCTCGATG CGCTGGCGGA CGACACCGCC CGCATCCAGA CGGTCGTCTG CCGCCACGAG
GCGGCCGCCG CGAACATGGC CGAAGCGGTC GGCAAGCTGA CCGGCCGCCC CGGCATCGCA
TTCGTCACGC GCGGGCCCGG CGCGACCCAT GCGTCGATCG GCGTACACAC CGCGTTCCAG
GATTCGACGC CGATGATCCT GTTCGTCGGC CAGTGCGCAC GCGAACACCT CGACCGCGAA
GCCTTCCAGG AAATCGACTA CCGCCGGATG TTCGGCCAGA TGGCCAAATG GGTCGCGCAG
ATCGACGACC CGCGCCGCAT CCCCGAATAC CTGAGCCATG CGTTCCACGT CGCGACGTCT
GGCCGACCCG GCCCGGTCGT GCTCGCGCTG CCGGAGGATG TGCTGTCCGA CGCGTGCGCG
CCGCAGCCCG GCGTGCCGGC CGCGAAACGC ATCGCGGCCG CGCCGTCGCC CGCGCAGATC
GACGAGCTGC GCGAGCGGCT CGCGCGCGCG GAACGGCCGT TCGCGATCGT CGGCGGCAGC
GGCTGGACGC CGGACGCCTG CGCGAACCTG CGCACCTTCG TCGAACGCTG GCAATTGCCG
GTCGCGTGCG CGTTCCGCTT CCAGGACACG ATCGACAACG CGCACCCGAA CTACGCGGGC
GACGTCGGGC TCGGGATCAA CCCCGCGCTC GCGAAACGCA TCCGCGACGC CGACCTGCTG
CTCGTGATCG GGCCGCGCCT CGGCGAAGCG ACGACCGGCG GCTACACGCT GCTCGACATC
CCGAAAACGC GCCAGACGCT GATCCACGTG CATCAGGGCG CGGACGAACT CGGCCACGTG
TACGCCGCCG ACCTGCCGAT CGTGTCGGGC ATGCCCGAGA TCGCCGCGCC GCTGGCCGCG
CTCGAACCGC CCGAGCGGCC TGCGTGGGCC GGCGCGGCCA CCGACGCGCA CCGCGCGTAC
CGCGAATGGC ATGCGCCGCT GCCGATGCCC GGCGACGTGC AGCTCGGCGA CGTGATGGTG
CAGTTGCGCG AGCGCCTGCC GCACGACGCG ATCCTGACCA ACGGCGCGGG TAACTACGCG
ATCTGGCTGC ATCGCCACTT CGCGTACCGG CACTTCCGTT CGCAGCTTGC GCCGACGAGC
GGCGCGATGG GCTACGGGCT GCCGGCCGCG CTCGCGGCGA AGTCGCTGTA TCCGCAGCGC
GCGGTTGTCG CGCTCGCGGG CGACGGCTGC TTCATGATGG CCGGCAACGA GCTTGCGACC
GCGATGCAGT ACGGGCTGAA CATCGTCGCG ATCGTCATCA ACAACGGCCA TTTCGGCACG
ATCCGCATGC ATCAGGAGCG CAACTACCCG GGCCGCGTGC ACGGCACAGG GCTCACGAAT
CCCGATTTCG CCGCGTATGC GCGTGCGTTC GGCGCGCATG GCGAGACGGT CGAGCGCACT
GCCGATTTCG CGCCGGCGCT CGAACGCGCG CTGACCTGCG GATTGCCCGC GGTGATCGAG
ATCCGCATCC CGCAGGACGC CAGCACGCCG GCCGCGACGC TCGAACAGAT TCGCGAGCAG
GGCCGCCGCG CGCGCGGCGC ATGA
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| Protein sequence | MSHSKDLEPR ATTGARLLVD ALLANHVERV FCVPGESFLA VLDALADDTA RIQTVVCRHE
AAAANMAEAV GKLTGRPGIA FVTRGPGATH ASIGVHTAFQ DSTPMILFVG QCAREHLDRE
AFQEIDYRRM FGQMAKWVAQ IDDPRRIPEY LSHAFHVATS GRPGPVVLAL PEDVLSDACA
PQPGVPAAKR IAAAPSPAQI DELRERLARA ERPFAIVGGS GWTPDACANL RTFVERWQLP
VACAFRFQDT IDNAHPNYAG DVGLGINPAL AKRIRDADLL LVIGPRLGEA TTGGYTLLDI
PKTRQTLIHV HQGADELGHV YAADLPIVSG MPEIAAPLAA LEPPERPAWA GAATDAHRAY
REWHAPLPMP GDVQLGDVMV QLRERLPHDA ILTNGAGNYA IWLHRHFAYR HFRSQLAPTS
GAMGYGLPAA LAAKSLYPQR AVVALAGDGC FMMAGNELAT AMQYGLNIVA IVINNGHFGT
IRMHQERNYP GRVHGTGLTN PDFAAYARAF GAHGETVERT ADFAPALERA LTCGLPAVIE
IRIPQDASTP AATLEQIREQ GRRARGA
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