Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_0145 |
Symbol | |
ID | 6121828 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | - |
Start bp | 172852 |
End bp | 173736 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641636692 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001763447 |
Protein GI | 170731500 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.640079 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAACC TCACCGGCAT CGTCGCGTTC GTCCGCACCG CCGAAGCGCT GAGCTTCGTC GCGGCCGGCC GCGCGCTCGG CATCTCGGCG TCGGCGGTCG GCAAGACGAT CGCGAAACTG GAACAGTCGC TCGGCGTGCG GCTGTTCAAC CGCACGACGC GGCGCGTGAC GCTCACCGAC GAGGGGCGGC ATTTCTACGA GCGCTGCCAG CGCATCCTCG AGGATTTCCG CGACGCGGAG GCGACCGTGA CGGCGTCCGC GCAGCGCCCG CGCGGCAAGC TGCGCGTGAG CCTGCCGGTG ATCGGCTACC GCTTCCTGCT GCCGGTGCTG CCCGAATTCC GGCAGCGCTA TCCGGACGTC GAGCTCGATC TCGATTTCAA CGACCGGATG GTCGACGTGG TCGAAGGCGG TTTCGACGCG GTGATCCGCA GCGGCCCGCT GTCCGATTCG AGCCTGATGT CGCGGCGGCT CGGCCCGTTC GCGTTCGTGC TGTGCGCGAC GCTCGCCTAT CTCGCGCAGG CCGGCACGCC GCGCACGCCT CGCGAGCTCG AAGCGCACGA CTGCGTGCGC TACTGCTTCC CGACCACCGG CAAGCTGCAG GACTGGGCGC TCGCGGCCGA CGACGGCACG CCGCTCACGC TGCGCACCGC GATGACCTGC AACAACATGG AAGCGCTGCG CGGCGCCGTG CTCGCGGGGC TCGGCATCGG CTACATGCCC GACTTCCTCG CGCGCGACGC GCTCGAACAC GGCACGCTCG TCACCGTGCT CGACGACTAC CGCATCGCGC CGGGGCAGTT CTCGATCGTA TGGCCGTCGA GCCGGCAGTT GTCGCCGAAG CTGCGCGTGT TCGTCGATTT CCTGTGCGAG CGGCTGTTCA GGTAG
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Protein sequence | MENLTGIVAF VRTAEALSFV AAGRALGISA SAVGKTIAKL EQSLGVRLFN RTTRRVTLTD EGRHFYERCQ RILEDFRDAE ATVTASAQRP RGKLRVSLPV IGYRFLLPVL PEFRQRYPDV ELDLDFNDRM VDVVEGGFDA VIRSGPLSDS SLMSRRLGPF AFVLCATLAY LAQAGTPRTP RELEAHDCVR YCFPTTGKLQ DWALAADDGT PLTLRTAMTC NNMEALRGAV LAGLGIGYMP DFLARDALEH GTLVTVLDDY RIAPGQFSIV WPSSRQLSPK LRVFVDFLCE RLFR
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