Gene Bcenmc03_0086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_0086 
Symbol 
ID6121769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp100973 
End bp102187 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content66% 
IMG OID641636633 
Productsodium/hydrogen exchanger 
Protein accessionYP_001763388 
Protein GI170731441 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0475] Kef-type K+ transport systems, membrane components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.12771 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTCGG CGTTCTCATT CCTGCCCAAC TGGCCGCTCG CGCCGGATGC CGTGTTCTGG 
GCCGGGCTCG CGCTGTTTGC GGCCGGCCTG TGCGGCGAGC TGTGCTATCG CGCGTGGCGC
TTGCCGCGCA TCACCGGCTA TGCCGTGATC GGCCTGATCG CCGGTTCGTT CGGATTCGGC
GTGATCGACA CGAGCACCGA CGAAACCTCG CGACTGTTGA TGGACGTCGC GCTCGGCCTG
CTGCTGTTCG AGCTCGGCAG CCGCCTCGAC CTGCGCTGGA TTCGGCGCAA TCCGTGGCTC
GTCGCGTCGA GCCTCGCGGA AGCCACGCTC ACCTTCGTGC TCGTGCTGTT CGTGATGCTC
GCGCTCGGCG TATCGGGGAT GGTCGCCCTC GTGCTGTCGG CGATCGCGAT TGCGACGTCG
CCGTCGATGG TGATCCAGCT CAAGACCGAA CTGCGTGCGG AAGGGCAGGT GTCGCAGCGC
CTGATCACGC TCACCGCGCT CAACAGCGTG TATGCGATCG TCCTGACCAA GCTCGTGACG
AGCTGGCTGC ACCAGGAAGC GTACGGCAAC GTTTTCGCGA CGATCCTGCA ACCGCTCTAC
CTGCTCGCCG GTTCGTTCAT CGTCGCGTAT CTGGTCGCGC GTTCGTGCAA TTACCTGTTC
CGTCACATGA CCGCGACGAT GCGCGACGAG CATTCGTTCG TCGCGCTGTT CGGCCTCGTG
ATGCTCGCGA TCGCCGTCGC GCAAGCGCTG AAGCTGTCGA CGCTGCTCAC GCTGCTGCTC
GCCGGCATCA TCGTGAAGAA CCTCGAGGCG CGGCCGCAGC TGTGGCCCGA GCACTTCGGC
ACGGCCGGCT GGCTGCTGAC GGTGGTGCTG TTCGTGCTGA CGCTCACGTC GTTCACGTGG
GGCGACATCG CGCTCGGCGG CCTGCTCGCG ATCGTGCTGA TCGTCACGCG GCTCGTCGCG
AAGCTGGCCG GCGTCGTCGC GTTCGCTAAG CCGAGCGGCC TCGGGATGAA GCAGGGCGTC
GCGCTCGGCA TCGCGCTCAC GCCGATGTCC GCGCTGTCGT ACCTGCTCGT CGACGATACC
TACCAGCTCT ATCCCAATTT CGACCCGCAC CTGCGCGCGA TCGTGATGTG CTCGATCGTG
ATCCTGCAGC TCGTCAGCCC GTTCGTCGTC TATCGCTGCC TGTCGGCGGT CGGCGAACGC
AGCGACGGCA ACTGA
 
Protein sequence
MKSAFSFLPN WPLAPDAVFW AGLALFAAGL CGELCYRAWR LPRITGYAVI GLIAGSFGFG 
VIDTSTDETS RLLMDVALGL LLFELGSRLD LRWIRRNPWL VASSLAEATL TFVLVLFVML
ALGVSGMVAL VLSAIAIATS PSMVIQLKTE LRAEGQVSQR LITLTALNSV YAIVLTKLVT
SWLHQEAYGN VFATILQPLY LLAGSFIVAY LVARSCNYLF RHMTATMRDE HSFVALFGLV
MLAIAVAQAL KLSTLLTLLL AGIIVKNLEA RPQLWPEHFG TAGWLLTVVL FVLTLTSFTW
GDIALGGLLA IVLIVTRLVA KLAGVVAFAK PSGLGMKQGV ALGIALTPMS ALSYLLVDDT
YQLYPNFDPH LRAIVMCSIV ILQLVSPFVV YRCLSAVGER SDGN