Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_0075 |
Symbol | |
ID | 6121758 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | - |
Start bp | 88104 |
End bp | 88505 |
Gene Length | 402 bp |
Protein Length | 133 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641636622 |
Product | general secretion pathway protein I |
Protein accession | YP_001763377 |
Protein GI | 170731430 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
TIGRFAM ID | [TIGR01707] general secretion pathway protein I [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGTCGTC GCCTGCCCTT CCCCGTTTCT TCCGCCCGCG GCTTCACGAT GATCGAGGTG CTGGTCGCGC TCGCGATCAT CGCGGTCGCG CTCGCCGCGT CGATCCGCGC GGTCGGCACG ATGGCGACCA ACGCGTCCGA GCTGCATCGC CGGCTGCTGG CCGGCTGGAG CGCCGACAAC GCGCTCGCGC AGCTGCGGCT CACGCATGCG TGGCCGGAGG TCGGCGAACA GAGTTTCGAC TGCTCGCAAG GCAACGTGCA GCTCGTCTGC ACGCAGCGCG TGAGCACCAC GCCGAATCCG GTGTTCCGGC GCGTGCGGAT CTCGGTGAGC ATGCCCGGCC GCGCCGGCGT GCTCGCGCAG ATGGTGACGG TGGTCGCGAA TGAAACCAGC CGTCCGCTCT GA
|
Protein sequence | MRRRLPFPVS SARGFTMIEV LVALAIIAVA LAASIRAVGT MATNASELHR RLLAGWSADN ALAQLRLTHA WPEVGEQSFD CSQGNVQLVC TQRVSTTPNP VFRRVRISVS MPGRAGVLAQ MVTVVANETS RPL
|
| |