Gene Swoo_4915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4915 
Symbol 
ID6119296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5911441 
End bp5912709 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content44% 
IMG OID641636500 
Productnucleoside transporter 
Protein accessionYP_001763259 
Protein GI170729233 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1972] Nucleoside permease 
TIGRFAM ID[TIGR00804] nucleoside transporter
[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.105963 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAATAT TAATCAGTAT TGTTGGCATC ATCGCCCTGC TTTCAGTGGC TTTTCTTGCG 
TCTGAAAACC GTAAAGCCAT TAATTACCGC ACGGTTGGAC TGGCGTTTTT ACTGCAACTT
ATAATGGGTG CGTTTGTCAT CTATTCATCA TTCGGCCAAG CCGTTATTTT AAATATGGCA
GAAGCCGTTT CGACCGTGAT TGGCTACAGT AACGAAGGTA TGTCGTTTAT GTTTGGCGGC
CTTGTTAGCG ATAAAATGTA TGAATTGTTT GGCCCAGGTG GATTTGTTGT CGCCTTTAAA
GTTCTGCCTA TTATCGTGTT TTTCTCGGCT ATTTCAGCGG TGCTGTACTA TCTCGGAATT
ATGCAATGGG TGGTTCGCAC TGTTGGAGGC GCACTGCAAA AAATCCTAAA TACGAGTAAA
GCAGAGTCTA TGTCTGCCAG TGCCAACATC TTCTTAGGTG TGACAGAGGC ACCACTGCTG
ATTAAGCCTT ATATCCCTAA GATGAACCGT GCAGAGCTGT TTGCAGTAAT GTGTGGTGGT
TTAGCCTCGA TTGCTGGCAC CATGCTAGCC GGTTATGCCC AGCTTGGGAT TAAGATGGAA
TATCTTTTGG CGGCTTCGTT TATGGCCGCT CCTGGTGGCT TACTGTTTGC TAAGTTATTA
ATCCCGCAAA CTGAAAAAAT AAACGATCAA GACCTAACGG TTGTAGAGGA AAACCCACCT
GCCAATATTA TTGACGCAGC AACAACCGGC ACCATGAATG GTTTGTCATT AGCCATGGCT
GTGGGCGCAA TGCTATTTGC TTTTGTCAGT TTAGTAGCGC TAATGAATGG CATGATAGGT
GGTATTGGTA ATTGGTTTGG CTTTGATGGC CTAAGCTTAC AGCTGATCCT TGGCTATCTA
TTTGCACCTA TTGCTTGGTT AATGGGTGTG ACCTGGGATG AAGCACTATT AGCTGGCTCG
TTTATCGGCC AAAAAATTGT TATCAACGAG TTCTTTGCTT ATATCAACTT AGCACCATAT
CTAAACGGTG ACATGATTGT TGAGGCTACA GGCTTACCTA TGTCTGAACG CACCCAAGTG
ATCCTATCAT TTGCACTGTG TGGCTTTGCT AACTTAGGTA CGATAGCGAT TGCGATTGCC
GGAATTGGCG GCTTGGTGCC AGAGCGCCGC TCTGAAATTG CATCATTAGG TTTAAAGGCA
TTATTTGCGG GTATCTTGTC GAACTTGATG GCAGCAACCA TTGCTGGTTT GTTTATGAGT
CTTGCTTAA
 
Protein sequence
MQILISIVGI IALLSVAFLA SENRKAINYR TVGLAFLLQL IMGAFVIYSS FGQAVILNMA 
EAVSTVIGYS NEGMSFMFGG LVSDKMYELF GPGGFVVAFK VLPIIVFFSA ISAVLYYLGI
MQWVVRTVGG ALQKILNTSK AESMSASANI FLGVTEAPLL IKPYIPKMNR AELFAVMCGG
LASIAGTMLA GYAQLGIKME YLLAASFMAA PGGLLFAKLL IPQTEKINDQ DLTVVEENPP
ANIIDAATTG TMNGLSLAMA VGAMLFAFVS LVALMNGMIG GIGNWFGFDG LSLQLILGYL
FAPIAWLMGV TWDEALLAGS FIGQKIVINE FFAYINLAPY LNGDMIVEAT GLPMSERTQV
ILSFALCGFA NLGTIAIAIA GIGGLVPERR SEIASLGLKA LFAGILSNLM AATIAGLFMS
LA