Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4915 |
Symbol | |
ID | 6119296 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 5911441 |
End bp | 5912709 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641636500 |
Product | nucleoside transporter |
Protein accession | YP_001763259 |
Protein GI | 170729233 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1972] Nucleoside permease |
TIGRFAM ID | [TIGR00804] nucleoside transporter [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.105963 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAATAT TAATCAGTAT TGTTGGCATC ATCGCCCTGC TTTCAGTGGC TTTTCTTGCG TCTGAAAACC GTAAAGCCAT TAATTACCGC ACGGTTGGAC TGGCGTTTTT ACTGCAACTT ATAATGGGTG CGTTTGTCAT CTATTCATCA TTCGGCCAAG CCGTTATTTT AAATATGGCA GAAGCCGTTT CGACCGTGAT TGGCTACAGT AACGAAGGTA TGTCGTTTAT GTTTGGCGGC CTTGTTAGCG ATAAAATGTA TGAATTGTTT GGCCCAGGTG GATTTGTTGT CGCCTTTAAA GTTCTGCCTA TTATCGTGTT TTTCTCGGCT ATTTCAGCGG TGCTGTACTA TCTCGGAATT ATGCAATGGG TGGTTCGCAC TGTTGGAGGC GCACTGCAAA AAATCCTAAA TACGAGTAAA GCAGAGTCTA TGTCTGCCAG TGCCAACATC TTCTTAGGTG TGACAGAGGC ACCACTGCTG ATTAAGCCTT ATATCCCTAA GATGAACCGT GCAGAGCTGT TTGCAGTAAT GTGTGGTGGT TTAGCCTCGA TTGCTGGCAC CATGCTAGCC GGTTATGCCC AGCTTGGGAT TAAGATGGAA TATCTTTTGG CGGCTTCGTT TATGGCCGCT CCTGGTGGCT TACTGTTTGC TAAGTTATTA ATCCCGCAAA CTGAAAAAAT AAACGATCAA GACCTAACGG TTGTAGAGGA AAACCCACCT GCCAATATTA TTGACGCAGC AACAACCGGC ACCATGAATG GTTTGTCATT AGCCATGGCT GTGGGCGCAA TGCTATTTGC TTTTGTCAGT TTAGTAGCGC TAATGAATGG CATGATAGGT GGTATTGGTA ATTGGTTTGG CTTTGATGGC CTAAGCTTAC AGCTGATCCT TGGCTATCTA TTTGCACCTA TTGCTTGGTT AATGGGTGTG ACCTGGGATG AAGCACTATT AGCTGGCTCG TTTATCGGCC AAAAAATTGT TATCAACGAG TTCTTTGCTT ATATCAACTT AGCACCATAT CTAAACGGTG ACATGATTGT TGAGGCTACA GGCTTACCTA TGTCTGAACG CACCCAAGTG ATCCTATCAT TTGCACTGTG TGGCTTTGCT AACTTAGGTA CGATAGCGAT TGCGATTGCC GGAATTGGCG GCTTGGTGCC AGAGCGCCGC TCTGAAATTG CATCATTAGG TTTAAAGGCA TTATTTGCGG GTATCTTGTC GAACTTGATG GCAGCAACCA TTGCTGGTTT GTTTATGAGT CTTGCTTAA
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Protein sequence | MQILISIVGI IALLSVAFLA SENRKAINYR TVGLAFLLQL IMGAFVIYSS FGQAVILNMA EAVSTVIGYS NEGMSFMFGG LVSDKMYELF GPGGFVVAFK VLPIIVFFSA ISAVLYYLGI MQWVVRTVGG ALQKILNTSK AESMSASANI FLGVTEAPLL IKPYIPKMNR AELFAVMCGG LASIAGTMLA GYAQLGIKME YLLAASFMAA PGGLLFAKLL IPQTEKINDQ DLTVVEENPP ANIIDAATTG TMNGLSLAMA VGAMLFAFVS LVALMNGMIG GIGNWFGFDG LSLQLILGYL FAPIAWLMGV TWDEALLAGS FIGQKIVINE FFAYINLAPY LNGDMIVEAT GLPMSERTQV ILSFALCGFA NLGTIAIAIA GIGGLVPERR SEIASLGLKA LFAGILSNLM AATIAGLFMS LA
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