Gene Swoo_4899 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4899 
Symbol 
ID6119280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5894216 
End bp5895076 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content46% 
IMG OID641636484 
ProductF0F1 ATP synthase subunit gamma 
Protein accessionYP_001763243 
Protein GI170729217 
COG category[C] Energy production and conversion 
COG ID[COG0224] F0F1-type ATP synthase, gamma subunit 
TIGRFAM ID[TIGR01146] ATP synthase, F1 gamma subunit 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.579626 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.185974 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAACG CTAAAGAGAT TAAAACCAAG ATCGCGAGTG TACAAAACAC TCAGAAGATC 
ACGTCTGCTA TGGAGATGGT TGCCGCGAGT AAAATGCGTA AAGCACAAGA TCGCATGGCT
TCTAGTCGTC CATATGCAGA AAATATGCGT AAGGTGATCG GTCACGTGGC GCAAGGTTCT
CTCGAATATA AGCATCCATA TTTGGAAGTG CGAGAAGCCA AGCGTGTTGG TTACATTGTT
GTGTCAACCG ACCGTGGTCT TTGTGGTGGT CTGAACGTTA ACCTTTTCAA AAAGGTTGTC
GCAGACGTGA AGAAGCAGCG TGAAGCTGGT GCAGAAGTTG AATTCTGCCC AATCGGCGCA
CGAAGCGTAC AGTTCTTCAA TAGCTTTGGC GGACAAGTTT CTGCTCATGC TTCAGGTTTA
GGTGATGCTC CAAAGCTCGC TGACCTGATC GGAACAGTAC GTGTCATGCT TCAAGCATAC
AACGAAGGCA AGCTAGATCG TTTGTACGTG GTATTTAACA AGTTCGTTAA TACTATGTCT
CAGACGCCTG TGATCGAGCA GCTGCTACCT TTGCCTAAGT CAGAAGAAGA TGAGATTTCT
CATCACTGGG ACTACTTATA CGAACCAGAT CCAAAAGAGC TTTTGGATAC TTTGTTGGTC
CGTTATGTGG AGTCTCAAGT TTACCAAGGT GTTGTTGAAA ATATTGCATC CGAACAAGCG
GCCCGTATGG TTGCTATGAA AGCTGCAACA GACAACGCTG GTGAACTTAT CAGTGACTTG
GAGTTGGTCT ATAACAAGGC TCGTCAGGCT GCGATTACGC AGGAACTGTC GGAAATTGTT
TCAGGTGCCG CTGCCGTTTA G
 
Protein sequence
MANAKEIKTK IASVQNTQKI TSAMEMVAAS KMRKAQDRMA SSRPYAENMR KVIGHVAQGS 
LEYKHPYLEV REAKRVGYIV VSTDRGLCGG LNVNLFKKVV ADVKKQREAG AEVEFCPIGA
RSVQFFNSFG GQVSAHASGL GDAPKLADLI GTVRVMLQAY NEGKLDRLYV VFNKFVNTMS
QTPVIEQLLP LPKSEEDEIS HHWDYLYEPD PKELLDTLLV RYVESQVYQG VVENIASEQA
ARMVAMKAAT DNAGELISDL ELVYNKARQA AITQELSEIV SGAAAV