Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4879 |
Symbol | |
ID | 6119256 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 5866337 |
End bp | 5867542 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 641636460 |
Product | carboxyl-terminal protease |
Protein accession | YP_001763223 |
Protein GI | 170729197 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCACAAC TTATACGTTA TCTATCCTTC ACTCTGTTAG GCTTGGCGTT GGGCGTTTCT CTAACCCTAT CAAGTCAAGA AAATGCAGAA CAAGCTCAAT CGCGTCTAAA CTATCCACTG CTTCTCGATA TCATAGATAC AGTTGAAACT TACTATGTCA CAGAGTTCAC CCAAGATGAG TTAATCGCGG CGGCCATTGA GGGGATCTTT GCTAAGCTGG ATCCCTACTC AAACTTTCTC GATCAACAAG AGTTCTCCAA CATCAGGGAT GCCAATAAAG GAGAGTACTT TGGCTTTGGT GTCGAAATTG CCACTGAAGA TAATAAAATC ACCATCATCA CCCCATTTGC AAACTCCCCG GCGGATCTTG CTGGTATAGA ACCAGGCGAT CAGATACTCA AACTTAACAA TGAGCCCGTC GACTCCAACA GATTAGATTA CCTGTTAAAA GAGATTAAAC GGCACAGTCA GAATAACTTG CCAATCTTGC TGACCTTAAG CCATACAGGT ATGGACACTG AGTTTGAAGT GACTCTTATC CCTAGCGTTA TCTCAATCCA GTCAGTTAGC GCCAAAGTTA TTGAAGATCA AATTGGCTAT ATAAGATTAG CCAGCTTTCA GGACAACTCT ACAGAAGAGT TAGTTAAACA GTTAACTCAG TGGCAAGATG TCAGACTCTC CGGCATTATT CTCGATCTAA GAAACAACCC TGGCGGTCTA TTAGATCAAG CCATAAAAAT TGCAGATATC TTCCTATCTA AAGGAAGAAT AGTATCAACG GAGGGACGTT TTTTTGATGC CAATTCAGAG TATTACGCCT CACCACAGAC CATGTTATCC AATATTCCAA TGACCATACT CATCAATAAA GGCTCAGCCT CTGCCTCAGA GGTACTTGCA GCAGCGCTGC AGGAAAATCA CAGAGCAAAA GTGATAGGTG AGACCAGTTT TGGCAAGGGA ACCGTGCAAA GTTTAATTCC CACGCTAATT GAGGGAAACG CTATTAAACT CACCATAGCG AAATACACGA CGCCAAATGG TCGTGACATC AACAGCAAAG GTATAGAGCC TGATATAAAA CTGGATCTTA CGACTGTTAC AAACAACAAA AATGTGCCTA TAATCGACGA AATCATAATT CAAGATGAAA GCACACAAGA TAAAATTCTG AATTCTGCAA TTACTTGGAT TAAAACAAAA CAATAA
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Protein sequence | MSQLIRYLSF TLLGLALGVS LTLSSQENAE QAQSRLNYPL LLDIIDTVET YYVTEFTQDE LIAAAIEGIF AKLDPYSNFL DQQEFSNIRD ANKGEYFGFG VEIATEDNKI TIITPFANSP ADLAGIEPGD QILKLNNEPV DSNRLDYLLK EIKRHSQNNL PILLTLSHTG MDTEFEVTLI PSVISIQSVS AKVIEDQIGY IRLASFQDNS TEELVKQLTQ WQDVRLSGII LDLRNNPGGL LDQAIKIADI FLSKGRIVST EGRFFDANSE YYASPQTMLS NIPMTILINK GSASASEVLA AALQENHRAK VIGETSFGKG TVQSLIPTLI EGNAIKLTIA KYTTPNGRDI NSKGIEPDIK LDLTTVTNNK NVPIIDEIII QDESTQDKIL NSAITWIKTK Q
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