| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4875 |
|---|
| Symbol | |
|---|
| ID | 6119252 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 5862340 |
|---|
| End bp | 5862831 |
|---|
| Gene Length | 492 bp |
|---|
| Protein Length | 163 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641636456 |
|---|
| Product | preprotein translocase subunit SecB |
|---|
| Protein accession | YP_001763219 |
|---|
| Protein GI | 170729193 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1952] Preprotein translocase subunit SecB |
|---|
| TIGRFAM ID | [TIGR00809] protein-export chaperone SecB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGAAG TAGCAAACAA CGAACAACAA GATCCGCAAT TCAACATCCA ACGTGTTTAC
ACGAAAGATA TCTCTTTCGA AACGCCAAAC AGCCCAGCTG TATTCCAAAA AGAGTGGACT
CCAGAAGTTA AGTTAGATCT TGATACTCGT AGCGCTAAGT TAGCTGACAA TGTATTCGAA
GTTGTTTTAT CTCTTACTGT TACAGCTAAG AATGGTGAAG AAACTGCATT CCTATGTGAA
GTTCAGCAAG CTGGTATCTT CGCAATTAAC GGTCTGACTG AGCAGCAACT TGCTCACTCT
CTAGGTGCAT ACTGCCCTAA CATTCTTTTC CCATACGCTC GTGAAGCTGT GGGTAGCTTG
GTTGCTCGTG GTACTTTCCC ACAGCTAAAC CTTGCACCAG TTAACTTCGA TGCGCTTTTC
GCTCAGTACG TTAACCAACG TCAAGCTGGT GCTGAAGAAG CTGCTGCTAA AACTGAAGAA
GCAAGCGCTT AA
|
|---|
| Protein sequence | MAEVANNEQQ DPQFNIQRVY TKDISFETPN SPAVFQKEWT PEVKLDLDTR SAKLADNVFE
VVLSLTVTAK NGEETAFLCE VQQAGIFAIN GLTEQQLAHS LGAYCPNILF PYAREAVGSL
VARGTFPQLN LAPVNFDALF AQYVNQRQAG AEEAAAKTEE ASA
|
|---|
| |