Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4869 |
Symbol | |
ID | 6119246 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 5857118 |
End bp | 5858131 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641636450 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001763213 |
Protein GI | 170729187 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGACTA TCTATATATT GGCGGCTGGT AATGTCGTTG CTGGTGGTAT TATCAGTTTC TTGGATGTGT TCAGCTTCTG TAATACCTAT TGGCGGCGTA TGAACCCTGG CATTAGTGAA GATCTGTTTC ACTGCCATGT GATTTCGCCT GACGGCAAGC CTGTTAATAC CAATCAAGGG ATACAGGTTC CAGCAATTGG ATTGGAGGAG CCGGAAGATA TCTTAAATGC GGATGCGGTT ATTTTAGCTT CAGCCTTTGT GACTAACCGC GAGGAGTTTC AGCATTATCT TGAAGATTTT ACACCTCTTT TTAAACCCTT AACTCTCTTT GCTGCTTCTG AAAAGCCCCT TGCTGCATAC TGCTCTGGAA CCATGATGTT AGCCGCATCA GGTTTACTCA ATGGTAGGAG GGCGACTACT GTTTGGTGGT TGAGTGAGAT GTTTGAGCGT AACTTTCCAA AGGTGAGCCT CTGCCTTGAA CACTTGGTTG TTTCCGATGG TCATCTGCAT ACCGCGGGGG CAACCACCTC CAATTTGAGT TTGGCATTGC ACATCATAGG TTTATTGGCG GGAGAGCAAG TTGCCAACCA GATGGCTAAG ATACTGTTGA TCTCACCGAA TAGGAGCTCA CAACAGCCCT TTATGAATAT GGCGTTGGCT GTGGATGGCC ATAATCATAA AGATGAATTG GTCACTAAGA TTCAAAACTG GATGCAGCAG CATATTCAGC AAAGCTTTCT GCTTGATGAG GTTGCCGATA AGTTTGCTGT GGGAAAACGT ACCTTAATTA GGCGCTTTAA GAAGGCGCTA AATGAAACAC CTGCCAGCTA TATGCAGCGT TTGCGTGTTG ATGAGGCTAA ACGCCTGCTT GAAACGACAG AGTTAGCTCT GGAGCAGATA GTTGAGCGGG TAGGCTATGA GGATGTTAGC TCATTTCGAA AGTTGTTTAT CCAACTGACC AGCCTTTCTC CCCGCGCATA TCGACAGAAG TTCAACACTC ATGCTTGCTG TTGA
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Protein sequence | MKTIYILAAG NVVAGGIISF LDVFSFCNTY WRRMNPGISE DLFHCHVISP DGKPVNTNQG IQVPAIGLEE PEDILNADAV ILASAFVTNR EEFQHYLEDF TPLFKPLTLF AASEKPLAAY CSGTMMLAAS GLLNGRRATT VWWLSEMFER NFPKVSLCLE HLVVSDGHLH TAGATTSNLS LALHIIGLLA GEQVANQMAK ILLISPNRSS QQPFMNMALA VDGHNHKDEL VTKIQNWMQQ HIQQSFLLDE VADKFAVGKR TLIRRFKKAL NETPASYMQR LRVDEAKRLL ETTELALEQI VERVGYEDVS SFRKLFIQLT SLSPRAYRQK FNTHACC
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