Gene Swoo_4863 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4863 
Symbol 
ID6119240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5852567 
End bp5852944 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content48% 
IMG OID641636444 
ProductGntR family transcriptional regulator 
Protein accessionYP_001763207 
Protein GI170729181 
COG category[K] Transcription 
COG ID[COG1725] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAGAAC AAATAAATGT CAACCCCAGT AGTGGTGAAC CCATATATCG ACAATTGAGC 
GAGCAGATTG TGCGTTTGAT TGTGGGTGGC CAACTGCAAG CTGAGCAAGT GTTGCCTTCG
GTAAGGCAGA TGGCTGAGCA TCTTTCTGTT AACCCTATGA CTGTGTCCAG AGCGATACAG
CAACTGGTTG AGCAGGGATG GTTAGAGCGA AGACGGGGAC AGGCGACTCG AGTTGCCACT
CGAGAAGTTG ACGAGAACAG TTCTAGTCTT GAGTTAGTAA AGCCTCAGGT TACCGCTTTA
GTGTCTCAGG CTAAGCAGTT AGGCATTACG CCTGATGAGT TAACTAGCTT GATAGAGAGC
TGCTGGAAAA GTCGTTAA
 
Protein sequence
MLEQINVNPS SGEPIYRQLS EQIVRLIVGG QLQAEQVLPS VRQMAEHLSV NPMTVSRAIQ 
QLVEQGWLER RRGQATRVAT REVDENSSSL ELVKPQVTAL VSQAKQLGIT PDELTSLIES
CWKSR