Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4845 |
Symbol | |
ID | 6119222 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 5834750 |
End bp | 5835937 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641636426 |
Product | hypothetical protein |
Protein accession | YP_001763189 |
Protein GI | 170729163 |
COG category | [R] General function prediction only |
COG ID | [COG2819] Predicted hydrolase of the alpha/beta superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.113278 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTAAAAA CGCTAATGTT TAGCCTGAGC TTACTTTTTG TACTTGTGCT AAATATCGCT TCGGTTAATG CTCAAAGCAG TGCTGGACAG GAGCTAATCA CTACGCTTGA TGTCGCCACT TCATACTCTG ATAAGCCTAT CACTTTTAAT GTGACCTTAC CTCCGAGTTA CTTTAATAAC AAAGATAAAC GTTATCTTGT GCTATTTGAC TTTCATCCCC GTAGTCAGGC ATATCTTAAT GGTATGCACG ATTGGATGAG CCACAATGGT GATTGGCCAT GGTTGGAAAC GATTATCGTC ACCGCGCCCG ATGGCGATAA AACTCTGGGT GAATTAAAAG AGTTAGCCAT TGAGGAGAGA GGCGATACTA AGCTGCTCGA CTTTATGGAG TTGGCACTAT TACCGACTAT CGATAAGCAG TATAGAACCA ATGGCTTTCG GATCATGAAT GGCTTTACTG GTAATGCTGG ACTTGGCCTC TATACCTTGC TTAACCGACC AGAGCTGTTT AATGCATACT TTGTCGCAAG CCCTGTATTA AGCAAAGATT TTGCTTTTGT TATTAAAGAT GCACCGAAAA AACTGGCAGC AATGAAAGGG AAGCCACGTT TTCTGTTTAT GAGCACTAGT GACAGTGGCT TTGAGCAGAG GCAATTGGCT AGCTTTGCTG AGATGGAGAC CATAATAAAA GCCACGGCTT CGCCAGCGTT GGAATACCAT ATTAAACGTT TTGATGGCAG CTATTACATG ACTCAACCTA TTTTGGCGAC AGCCTATGGT ATTGAGTTAC TCTTTAATGA TTACCATAAG ATGCTTGAGC CTGATTCAGA GATATCAAGT AAAGGCCCAC AAGCGATACT TGCTCATTAT CAATATCTTA CTGATGAAAA GTATGGGTTC GAAGTGCCTG CAACGGCCTC TCTCATTGCC CTTGCTAAGT ATGAAGCTGA TAAAGGCGGT AAAACGGCAA AAAATAAAGC GATAGCCATC TATCAAGTTG CCGTGGATGC ATATCCTCAC TCACATACTG CCCACCATGC TCTTGCACAA GCTTATGCTG AAGTGGGAGA GTTTGAAAGG GCTGTTACGC ATGAAAAGCT AGCTTTGAAA AATACAGACC ACCCCTTTTG GAGGAATAAA TACACCGAGA GGTTAGTCGA ATTGGAAGTA AGAAAAAAAG CGATGTAA
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Protein sequence | MLKTLMFSLS LLFVLVLNIA SVNAQSSAGQ ELITTLDVAT SYSDKPITFN VTLPPSYFNN KDKRYLVLFD FHPRSQAYLN GMHDWMSHNG DWPWLETIIV TAPDGDKTLG ELKELAIEER GDTKLLDFME LALLPTIDKQ YRTNGFRIMN GFTGNAGLGL YTLLNRPELF NAYFVASPVL SKDFAFVIKD APKKLAAMKG KPRFLFMSTS DSGFEQRQLA SFAEMETIIK ATASPALEYH IKRFDGSYYM TQPILATAYG IELLFNDYHK MLEPDSEISS KGPQAILAHY QYLTDEKYGF EVPATASLIA LAKYEADKGG KTAKNKAIAI YQVAVDAYPH SHTAHHALAQ AYAEVGEFER AVTHEKLALK NTDHPFWRNK YTERLVELEV RKKAM
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