| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4742 |
|---|
| Symbol | |
|---|
| ID | 6119119 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 5723385 |
|---|
| End bp | 5725301 |
|---|
| Gene Length | 1917 bp |
|---|
| Protein Length | 638 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641636324 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001763087 |
|---|
| Protein GI | 170729061 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.681757 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGGAT TATTGTCTTT AACTGTTTTA CTCATTTTCA TGGCCCTTTT AGGGGGCTGT
CATGATTCAA AGCAGCTTGA ACCAGCACCA TCTACCCCCA CGCAGCCTCC TGCAAACCCA
GCTAGTGAAG TGACCTCACT ATCTGTGCTC ATCATAGATC AGAACTATCG AGCCTTAGAG
GCGGTGAAGT TGACCTTAAG TAGCCAAGAT TTTGTTTTGG AGGTGGAGAC TGATAGCGAA
GGGAGAGCTC ATTTTGAGGT CGATTATGGC AAGCTAAACT TTCCGCTTAT CTTATCCAGT
AAAAAGCTGG GGTATAGCAA TCAGGTTAAG GTGATTCAAG ACCTTGCAGA GAAAGGAGAG
AATCAATTTC AGCTACCAGT TTTGCAGCGT CAATTACCTA TAGTAATTGA AGCTGAGGGG
GAAGCTGAGC TTTTTACGAC CGATGGGGCT TATCTTATGT TGCCTGCAAA CGGGCTTGTT
GATGGGGATG GAAATAGAGT GAGTGGGGAA GTTTATGTCA CCATTACCCC ATTGAATACT
GCCAACCCCG ATGGATTAAA GCTGTTTCCC GGTAACTTTG AGGGGCTATA TCCAGGGCTT
GATGAAACGA GTCCAATTGC CACTTATGGG ACGACTGAGT TTCACTTTGA GCAGGGGGGA
GATAAGTTGA ATCTAGCTCC CGGAGTTGAG GCGGTTATTG AGCTGCCCAT CTATGTCGCT
CAGCATGTCG ATGGCAGCGC AGTTGTAACT GGAGACAGGA TCGAGTTATG GCATTTAGAG
GAAGATAGCG GTCTCTGGCA GAACTACGGG TATGGTGAGG TGGTGGATTC GAAAAGATCA
CCAACTGGTT TCGCTTTACG GGCGAGTGTC CCTCACTTTA GCTGGTGGAA TGTCGATGTC
GCTCCGGAGA CCAGAGTTAT TAATCTTACT GTCACAGGTG AGGTGAGTGG CGAATGTAAA
GTTGGACTTA ATGCAGATAT GGCTTCAAAT TCAAGGCCGG GGTTGAGAGC TTCCACTCAG
GTATCAATTC CGAGTAATTC AAGCAGGCGG CTGTTAATTC CGAGTGGGAG ACAGGTTAAC
TTTAGTGCTG TACTCAATGC CAATGGTCAG GTTTATCTTG GTGAGCTTCA AGTGGCCGCC
AATAATACCG ATGATGATTT TACCATAGAG GTGGTGGCTG AAGGAGGAGT TAACCCTGAA
GACCCAGCTC CCTATATTGC AAAGATCTTT GCGAAAACTA CCCCTGAGTT TGAATACGAC
TTAATCACAA AAACACATAG GCATACGGCT AATATTATTC ATTATTACTG GGATGCTAAG
ACAGGCCATC CGAGACAAGA TGGATGCAGT GAAGATAGGA TGCCTGATGG TGATCCTAAA
TTAGATATCC ATTTGATGTC TGATGCGAGG TTGTATGAAG ATGTTGAGTT GGGCAATGAG
GCTGGTCAAA TAGATCTCGC GGTATCTCCT TTTGATGTAG TGACGCAGGG GGAGACTCTG
CCCGCCGATC CTGAGTTTAT CTCATTAAAC CTGCTTGCTA GCAATACTTT TGGGAGTGCT
AGCCGAGTGA TTGAGGTACC AAACCCAAGA GGCGCTGCCC CCAAATTAAA AGGGATCAGA
AGTTACTCTC ATGATAAGTA CCAAACCTTG GATGTTAGAT GGAGTGTGGA AGGGGCTGAT
TCTGGTCATA TTGAAGTTTG GCCTTTAAAT GATCAAGCTG GCCCTGCTCT AATTGTTGAG
GAGATTGACC CTTTTGCTAA ACATGCTCAA TTAGCGCTTG AAGGTTTACC AATAGAGGGT
TTAAGTATTA AAGTAACTTA TGAAAATCAG TATGATAAGC TAGAGGTTCC TATTGTTATT
AGTGGTGAGG CTTGTGATCT TATGTCTGAT CTTCCCTGTG ACCAACCGAC AAATTAG
|
|---|
| Protein sequence | MKGLLSLTVL LIFMALLGGC HDSKQLEPAP STPTQPPANP ASEVTSLSVL IIDQNYRALE
AVKLTLSSQD FVLEVETDSE GRAHFEVDYG KLNFPLILSS KKLGYSNQVK VIQDLAEKGE
NQFQLPVLQR QLPIVIEAEG EAELFTTDGA YLMLPANGLV DGDGNRVSGE VYVTITPLNT
ANPDGLKLFP GNFEGLYPGL DETSPIATYG TTEFHFEQGG DKLNLAPGVE AVIELPIYVA
QHVDGSAVVT GDRIELWHLE EDSGLWQNYG YGEVVDSKRS PTGFALRASV PHFSWWNVDV
APETRVINLT VTGEVSGECK VGLNADMASN SRPGLRASTQ VSIPSNSSRR LLIPSGRQVN
FSAVLNANGQ VYLGELQVAA NNTDDDFTIE VVAEGGVNPE DPAPYIAKIF AKTTPEFEYD
LITKTHRHTA NIIHYYWDAK TGHPRQDGCS EDRMPDGDPK LDIHLMSDAR LYEDVELGNE
AGQIDLAVSP FDVVTQGETL PADPEFISLN LLASNTFGSA SRVIEVPNPR GAAPKLKGIR
SYSHDKYQTL DVRWSVEGAD SGHIEVWPLN DQAGPALIVE EIDPFAKHAQ LALEGLPIEG
LSIKVTYENQ YDKLEVPIVI SGEACDLMSD LPCDQPTN
|
|---|
| |