| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4732 |
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| Symbol | |
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| ID | 6119109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5709087 |
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| End bp | 5710310 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641636314 |
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| Product | general secretion pathway protein F |
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| Protein accession | YP_001763077 |
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| Protein GI | 170729051 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | [TIGR02120] general secretion pathway protein F |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0181431 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGCGT TTGAATATAA GGCATTAGAT AATAAGGGAA AGCAGCAGAA AGGTGTGATG
GAAGCTGATA CGGCGCGTCA TGCCCGTGGT CAGTTAAGAG AACTGCGCCT GATGCCGCTG
GAGATTGTGC CAGTTGTAGA GAAGGAGACC AAGGCGAAAA CCGGTGGTAA AAGCCTGTTT
CAACGTGGGA TCTCTGTCGC TGAACTCGCC CTTATTACCC GTCAGATTGC TACCTTAGTG
GCGGCTGGTT TACCTGTTGA AGAGGCGCTA AAAGCCGTTG GTCAGCAGTG TGAGAAAGAT
AGGCTCGCCA GCATGATCAT GGCGGTTCGC TCCCGTGTCG TTGAGGGTTA TAACTTAGCC
GACTCTATGG CCGAGTTCCC CCATATCTTT GACGATCTCT ACCGCGCTAT GGTGGCTTCC
GGTGAAAAAT CTGGCCACCT AGAAGTTGTA CTTAATCGAC TTGCCGATTA CACCGAGCGT
CGCCAACAGT TAAAGAGCAA GATGACTCAG GCGATGATCT ACCCAGTGGT TCTTACCGTT
GTCGCTATCA GTGTTATCGC TATCTTGCTT GCGGCGGTAG TGCCTCAAGT TGTTGGTCAA
TTTGAGCATA TGGGCCAGGA GCTCCCCTGG ACAACCTTGC TGCTTATCGC CTCTTCAGAC
TTTATCAGAG ACTACGGCAT TATCATTTTA GGCGCTGCTT TTGCGCTGTT TGTACTCTTT
AAGCGTATGC TCACTAAGCC TGAATTTAGG ATGAAATACG ATTCTCTACT ACTGACACTT
CCTGTTATAG GCAGGGTGAG TAAGGGATTA AACACGGCGC GTTTTGCTCG TACTTTAAGT
ATCTTAACTG CCAGCTCTGT GCCTCTGCTC GATGCGATGC GTATCGCCAG TGAGGTCTTA
GTCAATGTGA AAGTTCGAGC GGCAGTAGAG GAAGCAACAG CGCGAGTTCG TGAAGGAACC
AGCTTAGGCG CTGCACTGAC GAATACGAAA CTTTTTCCGC CTATGATGCT CTATATGATC
ACCTCGGGTG AAAAGAGTGG ACAGCTAGAG CAGATGCTTG AGCGCGCTGC CGATAACCAA
GATAGAGAGT TTGAGTCCAA TGTGAATATC GCTTTGGGTG TTTTTGAGCC TCTATTAGTG
GTGAGTATGG CCGCTGTGGT ACTGTTTATC GTGCTGGCAA TTCTGCAGCC AATCTTAGAG
TTGAATAACA TGATTAGTGG CTAG
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| Protein sequence | MPAFEYKALD NKGKQQKGVM EADTARHARG QLRELRLMPL EIVPVVEKET KAKTGGKSLF
QRGISVAELA LITRQIATLV AAGLPVEEAL KAVGQQCEKD RLASMIMAVR SRVVEGYNLA
DSMAEFPHIF DDLYRAMVAS GEKSGHLEVV LNRLADYTER RQQLKSKMTQ AMIYPVVLTV
VAISVIAILL AAVVPQVVGQ FEHMGQELPW TTLLLIASSD FIRDYGIIIL GAAFALFVLF
KRMLTKPEFR MKYDSLLLTL PVIGRVSKGL NTARFARTLS ILTASSVPLL DAMRIASEVL
VNVKVRAAVE EATARVREGT SLGAALTNTK LFPPMMLYMI TSGEKSGQLE QMLERAADNQ
DREFESNVNI ALGVFEPLLV VSMAAVVLFI VLAILQPILE LNNMISG
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