| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4726 |
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| Symbol | |
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| ID | 6119103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5704503 |
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| End bp | 5705702 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641636308 |
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| Product | general secretion pathway protein L |
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| Protein accession | YP_001763071 |
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| Protein GI | 170729045 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3297] Type II secretory pathway, component PulL |
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| TIGRFAM ID | [TIGR01709] general secretion pathway protein L |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGTGA GTGAAAGATT ATTTATTCGC TTAGGAACAA GTTCAGATCA AGCATGCTCT
TGGTTGGTTT GGTCCGAGCA GGAGCAGGAG ATCATCGCTT CAGGTGAGCT AAAAGATGCC
AGTGCATTAA GTAGCTTAAC TGAGCGTGCC GGTAACCGTC CTGTGGATGT GTTGGTGCCA
TCATCTGCGA TCACATTGAC CTCTGTGGAG TTGCCAGAAA AAGGGCAACG CCAAGCCATT
CAAGCGCTTC CTTTTATGTT AGAGGAGTCG CTAGCTGAAA ACGTCGATGA GCTTCATTTT
GTCCCCGGTC CACGTACCGA TGGCGAGCTG AGTGTTGCCG TTGTTGCACA TCAGCAGATG
CAGGATTGGT TAAGCTGGTT ACATGAGGCT GGGCTTAAAG TTAAGAATGT TGTGCCTGAC
TGCTTAGCTC TTCCTCTTGA TGAGTGCCAG TGGGCAGCGA TTAAGTTTAA CCAAGAGTAT
CTGGTTAGAA CCGGTGAAGG TTCTGGTGTG AGTTTGACTC AAGACTGGTT AGATACGCTA
CTGCCTAGAT TGTTACCAGA AGGGCAAGAG ACACCTGTGA CCGTTGCCGG ACACAGTGAA
CTGGCCTTTG CTGGTGCAGA TATCAAGCCT CAAGCCCTTG AGCTGCCTAT GTTAGTACTG
GCTAAAGGGA TACTTTCAGC TCCCCTGAAT CTGTTATCTG GTGTTTATAC CCCTAAGCGT
GAATACGGTA AAAATTTACT GCTTTGGCGT AATGTCGCCA TTGTGATTGG TGTTGCCTTA
GTACTTGGTT TAGTTAATAA AGGGCTCAAT ATTCATCAGA TGAATACAGA GCAGGCGAGA
CTGAAAGCGG AAAGTGAAGC TATCTACAAG CGAGCGGTGC CCGGCAGTTC GAGAATTGTA
AACCTGAGAT CTCAGATGGA GAAACAGCTG CGAAGCATGC AGGGAGGCAG TGGTGGCAGT
GAGTTTTTCA CTATGCTTCA AGGCTTAGAA CCCGCCTTTA CTCAAGTGCC AGAGCTAAAG
CCTACGACCT TGCGTTTTGA CAGCGTCCGC AATGAACTGA GAATGCAGGT CATCGCTAAG
AGTTATGCCC AGGTTGAGCA GTTTAAGACG ATAGTGTCAG CCTCCTATCA GCTTGATTCA
GGAGCGATGA ACAGTGGTGA AGACTCAGTG ACCAGCACCT TAACGCTGAG GAGCAAATAA
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| Protein sequence | MNVSERLFIR LGTSSDQACS WLVWSEQEQE IIASGELKDA SALSSLTERA GNRPVDVLVP
SSAITLTSVE LPEKGQRQAI QALPFMLEES LAENVDELHF VPGPRTDGEL SVAVVAHQQM
QDWLSWLHEA GLKVKNVVPD CLALPLDECQ WAAIKFNQEY LVRTGEGSGV SLTQDWLDTL
LPRLLPEGQE TPVTVAGHSE LAFAGADIKP QALELPMLVL AKGILSAPLN LLSGVYTPKR
EYGKNLLLWR NVAIVIGVAL VLGLVNKGLN IHQMNTEQAR LKAESEAIYK RAVPGSSRIV
NLRSQMEKQL RSMQGGSGGS EFFTMLQGLE PAFTQVPELK PTTLRFDSVR NELRMQVIAK
SYAQVEQFKT IVSASYQLDS GAMNSGEDSV TSTLTLRSK
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