| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4706 |
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| Symbol | |
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| ID | 6119078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5676502 |
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| End bp | 5677464 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641636283 |
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| Product | biotin--protein ligase |
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| Protein accession | YP_001763051 |
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| Protein GI | 170729025 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0340] Biotin-(acetyl-CoA carboxylase) ligase |
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| TIGRFAM ID | [TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region
[TIGR00122] BirA biotin operon repressor domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.144079 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00201782 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATTGATC AATGGCAGCG TAAACGTGAG ATTTTGTCTG TACTCGATTC TGAGCAGTTT
GTTTCTGGTG AAGCTTTAGC TGCAAAGCTT GGGGTGTCTC GAACTGCCAT CGCTAACCAC
ATTAGTGCGT TAGAGGAGTA TGGTGTCGAG GTGTTTAGCG TCAAAGGAAA GGGATATAAA
TTAGCTAACT CACTCTCTTT GATAGATGAA ACTCTATTAA AAGAGGCTGT TACACAACGT
TGTTTTTATT ACGATGAGAT CCCCAGTACG AACGCTTTTT TGCTTAAGCA TTGTGAGGAG
CTATCTTCCG GTGATATCTG TGTTGCTGAG TATCAATCGG CAGGACGAGG TCGCCGTGGA
AGAACTTGGG TTTCTCCCTA TGGATGCCAT CTATATTGCT CTATGTACTG GAACTTATCC
CAAGGGATGG CTCAAGCTAC TGGATTAAGT CTGGTGGTTG CCTGCTCTTT GGTTAAAGTG
CTCAATAATT TCGGGATCCA TGGCCTAGGT GTGAAGTGGC CAAATGATAT CTATCTTGAT
AATAAAAAAT TAGCCGGTGT GTTAGTTGAG ATGAATGGTC AGGCCGATAC TGAGTGTCAT
CTGGTTATTG GGATCGGGAT TAATATGTCT ATGTCTCGTG CCCAAGGAGA TAAGATTGAT
CAACCATGGA GTGATCTTTC TCAAAGCAGA GTCGTGCCGA GTAAAACCGA GTTAACAATC
TCATTGCAGC GCCAGCTCAA TGAAGATCTT ACTTTATTTG AAAAAGAGGG GTTATCGGCA
TTTTTAATTC GCTGGAAAGA GGCTGACATC TTTGATGGTA AGCATGTAAA ACTCTTAATG
GGTGAGCAGC GTATTGATGG AGTTTGCAAA GGTATCGACA AAACAGGGTC CATCTTATTG
AAAACTGATA AGGGAGTAGA GTCTTTTGTT GGTGGTGAGA TAAGCTTAAG AAGTGCCGAA
TAG
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| Protein sequence | MIDQWQRKRE ILSVLDSEQF VSGEALAAKL GVSRTAIANH ISALEEYGVE VFSVKGKGYK
LANSLSLIDE TLLKEAVTQR CFYYDEIPST NAFLLKHCEE LSSGDICVAE YQSAGRGRRG
RTWVSPYGCH LYCSMYWNLS QGMAQATGLS LVVACSLVKV LNNFGIHGLG VKWPNDIYLD
NKKLAGVLVE MNGQADTECH LVIGIGINMS MSRAQGDKID QPWSDLSQSR VVPSKTELTI
SLQRQLNEDL TLFEKEGLSA FLIRWKEADI FDGKHVKLLM GEQRIDGVCK GIDKTGSILL
KTDKGVESFV GGEISLRSAE
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