| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4687 |
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| Symbol | rplB |
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| ID | 6119056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5653758 |
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| End bp | 5654585 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641636261 |
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| Product | 50S ribosomal protein L2 |
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| Protein accession | YP_001763032 |
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| Protein GI | 170729006 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0090] Ribosomal protein L2 |
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| TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000499794 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000235543 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGGCAATTA TTAAGTGTAA GCCAACTTCT GCCGGTCGTC GTCACGTAGT TAAAGTGGTG
AATACTGACC TGCATAAGGG TAAACCTTTT GCTGGCCTGT TGGCTAAGAA GTCAAAAAGT
GGTGGCCGTA ATAATACTGG CCGTATCACA GTTCGTCACG TAGGTGGTGG ACACAAGCAG
CATTACCGTA TCATTGATTT TAAACGTATC AAAGACGGTA TCCCTGCAAA GGTTGAGCGT
TTGGAATATG ATCCAAACCG CACAGCTAAC ATCGCACTTG TTTTGTATGC TGATGGTGAG
CGTCGTTATA TCCTTGCTGC TAAAGGCATG CAAGCTGGTG ATAAGATCCA GTCTGGTATC
GATGCTGAAA TCAAAGTGGG TAACGCTTTG CCATTACGCA ACATCCCAGT AGGTAGTGTT
GTACACGCAG TTGAAATGAA GCCTGGTAAA GGTGCTCAGA TCGCTCGTTC AGCAGGTACT
TATGTACAAG TTGTTGCTCG TGATGGCGAA TACGCTACTC TACGTCTTCG CTCTGGCGAA
ATGCGTAAAG TACCGGTTGA TTGCCGCGCG ACAATGGGTG AAGTTGGTAA TGCCGAACAC
ATGCTACGCC AGTTAGGTAA AGCAGGTGCT AAACGCTGGA GAGGCGTACG CCCAACAGTT
CGTGGTGTTG CAATGAACCC AATCGACCAT CCACATGGTG GTGGTGAAGG CCGTACTTCT
GGTGGCCGTC ATCCTGTTTC TCCATGGGGT GTTCCAACTA AGGGTTATAA GACTCGTAGT
AACAAACGCA CCGACAAGTA CATCGTACGT CGTCGCAATA AAAAGTAA
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| Protein sequence | MAIIKCKPTS AGRRHVVKVV NTDLHKGKPF AGLLAKKSKS GGRNNTGRIT VRHVGGGHKQ
HYRIIDFKRI KDGIPAKVER LEYDPNRTAN IALVLYADGE RRYILAAKGM QAGDKIQSGI
DAEIKVGNAL PLRNIPVGSV VHAVEMKPGK GAQIARSAGT YVQVVARDGE YATLRLRSGE
MRKVPVDCRA TMGEVGNAEH MLRQLGKAGA KRWRGVRPTV RGVAMNPIDH PHGGGEGRTS
GGRHPVSPWG VPTKGYKTRS NKRTDKYIVR RRNKK
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