| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4678 |
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| Symbol | rplE |
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| ID | 6119047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5650134 |
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| End bp | 5650673 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641636252 |
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| Product | 50S ribosomal protein L5 |
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| Protein accession | YP_001763023 |
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| Protein GI | 170728997 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0094] Ribosomal protein L5 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000391972 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000125829 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGGCGAAAC TGCATGATAA ATATCAAGAG ACTGTTAGCC CTGAACTTCA AAAGAAGTTT
GGTTTTACCA GTGTCATGCA AGTCCCTCGG ATTGAGAAAA TCACCCTTAA CATGGGTGTT
GGCGAAGCAG TAGCAGATAA GAAAGTTATG GAGCATGCGC TTCGTGACAT GACTGCTATC
GCAGGTCAAA AGCCAGTAGT GACTGTAGCT CGTAAGTCAG TGGCTGGTTT TAAAATCCGT
GAAGGCTACC CGATAGGCTG TAAGGTTACA CTGCGCGGTG AGCGTATGTG GGAATTCTTA
GAGCGTTTAG TTGATATCGC AATCCCGCGT ATTCGTGATT TCCGTGGCAT GAGCACTAAG
TCGTTCGATG GCCGTGGTAA CTACGCAATG GGTGTACGTG AGCAAATCAT CTTTCCAGAG
ATCCAATACG ATAAAATCGA TAAGATCCGC GGTATGGATA TTGTAATCAC TACTTCTGCG
AAGAATGACG AAGAAGGCCG AGCTCTGCTT GAAGCCTTTA ACTTCCCATT CAAGAAATAA
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| Protein sequence | MAKLHDKYQE TVSPELQKKF GFTSVMQVPR IEKITLNMGV GEAVADKKVM EHALRDMTAI
AGQKPVVTVA RKSVAGFKIR EGYPIGCKVT LRGERMWEFL ERLVDIAIPR IRDFRGMSTK
SFDGRGNYAM GVREQIIFPE IQYDKIDKIR GMDIVITTSA KNDEEGRALL EAFNFPFKK
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