Gene Swoo_4676 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4676 
SymbolrpsH 
ID6119045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5649401 
End bp5649793 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content45% 
IMG OID641636250 
Product30S ribosomal protein S8 
Protein accessionYP_001763021 
Protein GI170728995 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0096] Ribosomal protein S8 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000540573 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000898737 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAGCATGC AAGATCCTAT AGCGGATATG TTAACCCGTA TTCGTAATGG CCAAGCTGCT 
AAACACGTTT CAGTAACTAT GCCTTCTGCT AAGCTAAAAA TCGCTATCGC GAAAACGCTT
AAAGAAGAAG GTTATATCAC TGACTACGCC GTAGCAGATG AAGCCAAGCC TGTTCTTGAA
ATCACTTTAA AGTATTTCCA AGGTCAGCCA GTCGTTGAGA CTATCCAGCG CGTTAGCCGT
CCTGGTCTTC GTATTTACAA AGGTAAAGAC GAACTACCAA AGGTTATGGG CGGACTGGGT
GTCGCTATTG TGTCCACTTC TAAAGGTTTG ATGACTGATC GTACTGCCCG CCAAAATGGC
ATGGGCGGGG AAGTTATCTG CTACGTAGCA TAA
 
Protein sequence
MSMQDPIADM LTRIRNGQAA KHVSVTMPSA KLKIAIAKTL KEEGYITDYA VADEAKPVLE 
ITLKYFQGQP VVETIQRVSR PGLRIYKGKD ELPKVMGGLG VAIVSTSKGL MTDRTARQNG
MGGEVICYVA