| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4673 |
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| Symbol | rpsE |
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| ID | 6119042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5647979 |
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| End bp | 5648485 |
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| Gene Length | 507 bp |
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| Protein Length | 168 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641636247 |
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| Product | 30S ribosomal protein S5 |
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| Protein accession | YP_001763018 |
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| Protein GI | 170728992 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0098] Ribosomal protein S5 |
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| TIGRFAM ID | [TIGR01021] ribosomal protein S5, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000106514 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000000908127 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGGCTAAAT TTGAAGCTCA ACAGCAAAAA GACGATCTGC AAGAGAAATT AGTTGCAGTA
AATCGTGTTT CTAAAGTAGT TAAAGGCGGA CGTATCTTTA GCTTCACTGC ACTAACTGTA
GTCGGTGATG GTAATGGTAA AGTTGGCTTT GGCTATGGTA AAGCGCGTGA AGTACCTGCA
GCAATTCAGA AAGCGATGGA AAAGGCTCGC CGTAACATCG TTTCTGTTGA ATTGAACAAT
GGTACTCTGC ACCACCCTGT AAAGGGCCGT CACACTGGTT CGCGTGTATA CATGCAGCCA
GCATCAGACG GTACCGGTAT TATTGCCGGT GGCGCAATGC GTGCCGTATT GGAAGTAGCA
GGCGTTCATA ACGTTCTGTC GAAAGCATAC GGTTCTACTA ACCCGATCAA CATCGTTCGC
GCAACTGTCG ATGCGTTGGT GCACATGAAG TCACCATCAC AAATCGCAGC TAAGCGTGGC
CTGAATGTTG ATGAAATTCG AGGTTAA
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| Protein sequence | MAKFEAQQQK DDLQEKLVAV NRVSKVVKGG RIFSFTALTV VGDGNGKVGF GYGKAREVPA
AIQKAMEKAR RNIVSVELNN GTLHHPVKGR HTGSRVYMQP ASDGTGIIAG GAMRAVLEVA
GVHNVLSKAY GSTNPINIVR ATVDALVHMK SPSQIAAKRG LNVDEIRG
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