| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4651 |
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| Symbol | |
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| ID | 6119017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 5625322 |
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| End bp | 5626731 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641636222 |
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| Product | nitrogen metabolism transcriptional regulator, NtrC, Fis family |
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| Protein accession | YP_001762996 |
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| Protein GI | 170728970 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR01818] nitrogen regulation protein NR(I) |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.446316 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGAAC AGGTATGGGT ACTCGATGAT GATAGCTCTA TTCGCTGGGT TGTTGAGCGG
GCATTAAAAG GGGCAGAGAT AAGCAGTACC AGCTTCGCTG CTGCTGAGTC ACTTTGGGAT
GCACTAGATC ATGGTCAGCC TAAAGTCATT ATTTCAGACA TTAGAATGCC AGGCACAGAT
GGGTTAACAC TACTTGAGCG AATTCAGGTT CACTACCCTC ACATACCGGT CATCATAATG
ACTGCGCATT CTGATCTCGA TAGTGCGGTC AATGCTTACC AAGCAGGCGC ATTTGAATAC
CTGCCCAAAC CATTCGACAT TGACGAAGCG ATTGCACTTG TGGAGAGGGC CTTAACCCAC
TCCAATGAAC AGATTGTAAA GCAAAACGAT GAGCTAACGG TAAAAGCGCC AGAGATCATA
GGCGAAGCAC CTGCTATGCA GGAAGTGTTC AGAGCTATTG GCCGCCTTTC ACGCTCCTCC
ATCAGCGTAC TAATTAATGG ACAATCTGGA ACAGGTAAGG AGCTTGTTGC TGGCGCCCTT
CACAAACACA GCCCACGCAA AGAGAAGCCT TTTATTGCAA TTAACATGGC AGCGATCCCT
AAAGATCTTA TTGAATCTGA GCTTTTCGGC CACGAAAAAG GCGCATTTAC AGGGGCAGCA
GCAGTAAGAC AAGGGCGATT CGAACAAGCT AATGGAGGCA CGCTTTTCCT CGATGAAATT
GGTGATATGC CCCTCGATGT TCAAACCCGT TTACTGCGCG TATTAGCTGA CGGGCAGTTT
TATCGCGTTG GCGGTCATTC GCCAGTTCAA GTGGATGTAA GGATCATAGC TGCAACCCAC
CAAGACTTGG AGCTTCTGGT TCAAAAGGGA GAGTTCAGAG AAGATCTCTA TCATAGGTTA
AACGTCATAC GCGTCCACTT ACCGGCGCTC TCACAACGCA GGGAAGATAT TCCACAGTTA
GCACGTCACT TCCTAAGCTC CGCGGCTAAA GAGATTGCCG TAGAACCAAA ATCACTCACC
AAGGAGACGG CAGAGAAGCT CTCTCAGCTC CCTTGGCCAG GGAATGTAAG ACAGCTAGAA
AACACCTGTC GGTGGTTAAT GGTGATGGCC TCAGGGCAGG AGATTTTACC TCAAGATCTC
CCCCCTGAGC TTTTACAAGA ACCGAGTCAA ACCAACTCAT TATCCACAGG TGAGCCTGCA
GACTGGCAGG AATCATTGAA GCTTTGGATC GATGAGCGAC TCACTGCTGG AGAGAATGAC
CTCCTCACTG AAGTGCAGCC GGCTTTTGAA CGTATTCTGC TACAAACTGC TTTAGCCCAC
ACCAATGGTC ATAAGCAGGA AGCCGCCAAA CGTTTAGGTT GGGGGCGAAA CACGCTCACC
CGAAAACTCA AAGAGTTATC TATGGATTAA
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| Protein sequence | MNEQVWVLDD DSSIRWVVER ALKGAEISST SFAAAESLWD ALDHGQPKVI ISDIRMPGTD
GLTLLERIQV HYPHIPVIIM TAHSDLDSAV NAYQAGAFEY LPKPFDIDEA IALVERALTH
SNEQIVKQND ELTVKAPEII GEAPAMQEVF RAIGRLSRSS ISVLINGQSG TGKELVAGAL
HKHSPRKEKP FIAINMAAIP KDLIESELFG HEKGAFTGAA AVRQGRFEQA NGGTLFLDEI
GDMPLDVQTR LLRVLADGQF YRVGGHSPVQ VDVRIIAATH QDLELLVQKG EFREDLYHRL
NVIRVHLPAL SQRREDIPQL ARHFLSSAAK EIAVEPKSLT KETAEKLSQL PWPGNVRQLE
NTCRWLMVMA SGQEILPQDL PPELLQEPSQ TNSLSTGEPA DWQESLKLWI DERLTAGEND
LLTEVQPAFE RILLQTALAH TNGHKQEAAK RLGWGRNTLT RKLKELSMD
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