Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4617 |
Symbol | |
ID | 6118983 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 5588531 |
End bp | 5589478 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641636188 |
Product | prolyl aminopeptidase |
Protein accession | YP_001762962 |
Protein GI | 170728936 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | [TIGR01249] proline iminopeptidase, Neisseria-type subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.920468 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAAG CGCTTCCCGC GTTTCTTCGT AGAGATTGGA TAGATGTTGG TGACGGACAT GTGCTCCACC TAGCTCAGTA TGGCAATCCA AATGGTATTC CCTTGCTGTA CCTACATGGA GGTCCAGGTG GCGGCTGTGC AGGTGAGGAG CTGAAACTAT TTGATAGGGA CAGTTTTCGC ATCTTGATGT TAGATCAGCG CGGTGCTGGT CGTTCTAAAC CTAAAGGGGA GTTGAGGCAC AATGATCTGC AGTGCTTACT AAGAGATATT GAAGCGGTGC GCCTTAGGCT CAATATCGAA AGCTGGTGTG TCGTCGGTGG CTCATATGGT GCAACCTTAG GTTTTATCTA CAGTGGTCTA TTTCCTGATA GAGTGATCTC ACAAGTATTT TGGGGGTTAT TTGTGCCAAG TGACGAGGGA GTTCGTTGGT TATATGGCCC TGATGGAGCA TCGACCCTTT TCCCTCAAGA GTACCTCGCA TTTACCTCCC ACCAAGCCTA TACACGCTCA CTACAGACCC TGTTTAGTGA TTATCAAGAT GGCTTTAATA ATCCGAAAAT CGAGATCCAC AATGACTATA TCAATAGTTG GTTAATCTGG GAGTTAAGCT TATCTCTGCC GGGATTCCAG CCATCTGAAG CGAGTCTCTC CTTTGGTAAA AGCTTAGCCA GAATCGAGTT ACATTTTGCT GGTAATCAGT ACTTCAATTC CTATCGATTG ATGCGTGATG TGGCGGGTAA AATCAAAGCT AATACCATGA TACTACAGGG AGAAATGGAT TGGGTCTGTC CAACGATGAT CGGTGAGAAG TTTATCTCTC AATATGGTCA GAAAATGATA ACCTATTCGG TGATTAAAGG CGGGTACCAC GCTTTAGCCA ATGATAAGAT GTTTGATGAA GTCGTCTGTG CCGTAAGGAA GATGGCAGGT AGCGTAACGG ATACGTAA
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Protein sequence | MSQALPAFLR RDWIDVGDGH VLHLAQYGNP NGIPLLYLHG GPGGGCAGEE LKLFDRDSFR ILMLDQRGAG RSKPKGELRH NDLQCLLRDI EAVRLRLNIE SWCVVGGSYG ATLGFIYSGL FPDRVISQVF WGLFVPSDEG VRWLYGPDGA STLFPQEYLA FTSHQAYTRS LQTLFSDYQD GFNNPKIEIH NDYINSWLIW ELSLSLPGFQ PSEASLSFGK SLARIELHFA GNQYFNSYRL MRDVAGKIKA NTMILQGEMD WVCPTMIGEK FISQYGQKMI TYSVIKGGYH ALANDKMFDE VVCAVRKMAG SVTDT
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