| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4592 |
|---|
| Symbol | |
|---|
| ID | 6118958 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | + |
|---|
| Start bp | 5564715 |
|---|
| End bp | 5566790 |
|---|
| Gene Length | 2076 bp |
|---|
| Protein Length | 691 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641636163 |
|---|
| Product | ATP-dependent DNA helicase RecG |
|---|
| Protein accession | YP_001762937 |
|---|
| Protein GI | 170728911 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG1200] RecG-like helicase |
|---|
| TIGRFAM ID | [TIGR00643] ATP-dependent DNA helicase RecG |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.0000000346665 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | TTGAATAGAC TCGATCTTGT TCCTGTCACT GAACTTAATG GTGTTGCCAA AAAAATGGCT
GAACGCTTAG CTAAGCTCGG CATAAACACA GTACAAGATC TCCTGTTTCA CCTACCACTT
CGATATGAAG ATCGCACCCA GATCTATCCC ATCGCCTCAC TTTATCCCGG AAGCTACGGC
ACCATAGAAG CCGTGATCCA ATCAAGCCAG ATTGTTCAAG GCCGCAAACG CATGATGACC
TGCACAGTGC GTGATGATAC TGGCTCAATG GTACTAAGAT TTTTTAACTT CTCCATGGCT
CAGAAAAACG GCCTGCAAAA TGGCACTCTT ATCCGTGCTT ATGGTGAGAT CCGCCGTGGA
AAACAGCAAC CAGAGATCAT ACATCCGGAA TACAAGCTGG TCAGTGAATA TGACTCTGCA
GCCCTCAGTG ATACCTTAAC CCCTGTGTAT CCAACAACCG AGGGACTAAA ACAAGCCAGC
TGGATCAAGT TAACCGATCA GGCCCTGTCA CTGCTGGAAA ATGGCGGCCT GCAGGAACTA
CTTCCACCCC AGCTTCAGCC CAATAATTTA AGTTTGAAAG AGGCGCTGCA ACTGCTGCAT
CGCCCCCACA CTGGCGTGGC CCTGTTTGAG CTTGAGCAGG GAAACCACCC TGCGCAACAG
CGGCTCATTC AAGAGGAACT ACTGGCCCAT AACCTCAGTA TGTTGAAGCT AAGACAGCGT
AGTAATCAAG ATAACGCCAT CTCTATGCCT GCCACAGGAC AACTGCTCAA CCCTTTTCTG
AAAGAGCTTC CTTTTAAACC CACTGGCGCT CAGCAAAGAG TAGGCGCGGA TATCTGCCGC
GATCTTGAAA AACCATCACC CATGATGCGT CTTGTTCAAG GAGATGTGGG ATCAGGAAAA
ACCTTAGTGG CAGCTCTCGC CGCACTACAG GCGATCGAAA ATGGCTATCA AGTTGCCATG
ATGGCGCCCA CTGAACTGCT TGCCGAACAG CACGCCATTA ATTTCAGCCA ATGGTTTGAA
CCGTTAGGCC TAAAAGTTGG CTGGTTAGCG GGAAAACTTA AGGGCAAAAC AAGAGCTCAA
TCCTTAGCTG ATATAGAAAG TGGCGATGCC CATATGGTGA TCGGTACTCA TGCTATTTTC
CAAGATAAGG TGATCTTCAA TAAGCTGGCG CTGATTATCA TAGATGAGCA GCACAGGTTC
GGAGTGCATC AGCGTTTGGG GCTCAGAGAG AAAGGGATAA GCCAAGGGTT CCACCCACAT
CAGCTGATCA TGACCGCCAC TCCGATCCCC CGCACCTTAG CGATGACAGC CTACGCCGAT
CTCGATACCT CAGTGATCGA TGAGCTGCCA CCGGGACGCA CACCAGTCAC AACCGTTGCC
GTATCGGATG TTCGCCGCAG CGAAGTGATT GAACGTGTTA GACAAGCGGT GACCAATGAT
GGCAGACAAG TTTACTGGGT CTGCACCCTT ATTGATGAGT CTGAAGTGCT TGAGTGTCAA
GCAGCGGAAG ATACCGCTGC CGAGCTTTCG ATTGCTCTGG CCGAGCTAAA AATAGGTTTA
GTTCATGGCC GAATGAAGTC CGCTGAAAAA CAAGCTGTCA TGGCCGAATT TAAAGCCGGA
AACCTTAACT TATTGGTCGC TACAACCGTG ATCGAAGTGG GCGTAGATGT GCCAAATGCC
AGCTTGATGA TAATAGAGAA CCCTGAGCGA CTAGGACTGG CGCAGCTCCA CCAACTAAGA
GGCCGTGTCG GTCGAGGCTC TATCGCCAGT CACTGTCTAC TTATGTATAA AGCCCCTCTG
TCTCAGATGG CCACAAAGCG TCTAGGTGTA CTCAGGCAGA GCAATGATGG CTTTATTATC
GCACAGAAAG ATCTTGAGAT AAGGGGCCCA GGCGAAGTAC TCGGCACTAA ACAAACTGGG
GTGGCAGATA TGAAAATTGC CGATCTGATC CGCGACCAAT CACTCATTCC CCATATTCAA
AAGCTAGCCG TTCATGTGAT GGAGCAAGCT CCCGATAATG TCGATGGCAT AGTGCAGCGT
TGGCTTGGGG AGCGTGAGCA GTATGTACAG GCCTAA
|
|---|
| Protein sequence | MNRLDLVPVT ELNGVAKKMA ERLAKLGINT VQDLLFHLPL RYEDRTQIYP IASLYPGSYG
TIEAVIQSSQ IVQGRKRMMT CTVRDDTGSM VLRFFNFSMA QKNGLQNGTL IRAYGEIRRG
KQQPEIIHPE YKLVSEYDSA ALSDTLTPVY PTTEGLKQAS WIKLTDQALS LLENGGLQEL
LPPQLQPNNL SLKEALQLLH RPHTGVALFE LEQGNHPAQQ RLIQEELLAH NLSMLKLRQR
SNQDNAISMP ATGQLLNPFL KELPFKPTGA QQRVGADICR DLEKPSPMMR LVQGDVGSGK
TLVAALAALQ AIENGYQVAM MAPTELLAEQ HAINFSQWFE PLGLKVGWLA GKLKGKTRAQ
SLADIESGDA HMVIGTHAIF QDKVIFNKLA LIIIDEQHRF GVHQRLGLRE KGISQGFHPH
QLIMTATPIP RTLAMTAYAD LDTSVIDELP PGRTPVTTVA VSDVRRSEVI ERVRQAVTND
GRQVYWVCTL IDESEVLECQ AAEDTAAELS IALAELKIGL VHGRMKSAEK QAVMAEFKAG
NLNLLVATTV IEVGVDVPNA SLMIIENPER LGLAQLHQLR GRVGRGSIAS HCLLMYKAPL
SQMATKRLGV LRQSNDGFII AQKDLEIRGP GEVLGTKQTG VADMKIADLI RDQSLIPHIQ
KLAVHVMEQA PDNVDGIVQR WLGEREQYVQ A
|
|---|
| |