| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4591 |
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| Symbol | |
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| ID | 6118957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 5563981 |
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| End bp | 5564577 |
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| Gene Length | 597 bp |
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| Protein Length | 198 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641636162 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001762936 |
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| Protein GI | 170728910 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000001788 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGAGGATAT TACTGGCAGA AGATCAAGCT ATGGTCAGAG GCGCACTGGC TGCTTTACTC
AGCTTAGATG GCGAGTTTGA GGTCATTCAG GCCTGCGATG GCGATCAAGC GCTATCGCTG
CTAAAGGCGC AAACCTTTGA TCTACTGCTA ACCGATATTG AGATGCCTGG CTTTACCGGA
CTGGAGTTGG CTCAGTGGTG TCAGCAACAA AACAGTACCA TCAAGGTGAT TATTCTCACC
ACCTTTGGCA GAGCCGGATA CATTAAACGC GCTATCGAGT ACGGTGCAGG TGGCTTCTTG
CTCAAAGATG CCCCTTCGGA GAGTTTGATA CAGGGGATCA AACAGGTTAT GGCAGGTAAG
CGTGTTATCG ATCCTGAACT GGCTATTATG GCCGTCGGCG AAAATGATCC CCTCAGCGAT
AAGGAGCGCA AAGCGCTTCG CTTGGCCAGC GAAGGTAAAA CCACCTCAGA GATAGCCGCG
CTGCTGTTTA TCGCCGAAGG CACTGTGCGC AACTACCTCA GTGAAGCCAC TAGCAAGCTT
CATGGTTCCA ATCGCATTGA TGCAGCACGT ATTGCCAAAC AGAAAGGTTG GCTATAA
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| Protein sequence | MRILLAEDQA MVRGALAALL SLDGEFEVIQ ACDGDQALSL LKAQTFDLLL TDIEMPGFTG
LELAQWCQQQ NSTIKVIILT TFGRAGYIKR AIEYGAGGFL LKDAPSESLI QGIKQVMAGK
RVIDPELAIM AVGENDPLSD KERKALRLAS EGKTTSEIAA LLFIAEGTVR NYLSEATSKL
HGSNRIDAAR IAKQKGWL
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