Gene Swoo_4569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4569 
Symbol 
ID6118935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5539010 
End bp5539873 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content48% 
IMG OID641636140 
Producthypothetical protein 
Protein accessionYP_001762914 
Protein GI170728888 
COG category[S] Function unknown 
COG ID[COG1561] Uncharacterized stress-induced protein 
TIGRFAM ID[TIGR00255] conserved hypothetical protein TIGR00255 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000202204 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGATTCAAA GCATGACAGC CTACGCTCGA ATCGAGCACA AAGCAGAATG GGGCACAGCC 
TCTTGGGAAA TCCGTTCAGT CAATCAGCGC TATTTAGAGA CCTACCTGCG CCTGCCAGAA
CACTTCCGAA GCCTTGAACC TCTGCTAAGA GACCGTCTGC GTAAGCGCCT TAATCGTGGC
AAAATTGAGG TGAATCTAAG ATACGATCTT GCTGATAATA AAAACAGTGA GCTACAGCTA
AATCAAGACT TAGCAAAGCA ACTTGTCAAT GCAGCCAACT GGGTGAAACA GGAAGCGGGT
CAAGGTGAAT TAAACCTAGT TGATATCCTA AAGTGGCCTG GCGTTATGTC TGGCAGCGAG
CAGGATATGG ATGCTTTAGG CAAAGAGCTA CTTACCGCTT TTGATAGTGC TATCGATCAA
TTTATCGAAG CCCGTGGCCG TGAAGGTGAA GCGATTAAAA CCATGCTACA AACCCGTCTC
GACGCTATCG TTGAGCAAGT GGCTATCGTT CGTGAACATA TGCCAACCGT CATGCAGTGG
CAACGTGACA AGCTAACCAA TCGTCTAGCT GAGATAACAG GTGAACTCGA TCCAGCCCGA
CTCGAACAAG AGATGGTTAT CCTAGCGCAA AAAATGGATG TTGCCGAAGA GATGGATAGG
CTCGATGCCC ATGTCGCCGA AACACAACGC ATCCTCAAAA AAGGTGGCGC ACAAGGCCGT
CGACTCGACT TTATGATGCA AGAGTTCAAC CGCGAATCAA ACACCCTAGC GTCTAAGTCA
ATCAGTGCAG AAGTGACAGC AGCAGCGGTA GAGCTTAAGG TACTTATCGA GCAGATGAGA
GAACAAATTC AGAACGTGGA ATAA
 
Protein sequence
MIQSMTAYAR IEHKAEWGTA SWEIRSVNQR YLETYLRLPE HFRSLEPLLR DRLRKRLNRG 
KIEVNLRYDL ADNKNSELQL NQDLAKQLVN AANWVKQEAG QGELNLVDIL KWPGVMSGSE
QDMDALGKEL LTAFDSAIDQ FIEARGREGE AIKTMLQTRL DAIVEQVAIV REHMPTVMQW
QRDKLTNRLA EITGELDPAR LEQEMVILAQ KMDVAEEMDR LDAHVAETQR ILKKGGAQGR
RLDFMMQEFN RESNTLASKS ISAEVTAAAV ELKVLIEQMR EQIQNVE