| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4568 |
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| Symbol | rph |
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| ID | 6118934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5538084 |
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| End bp | 5538797 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641636139 |
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| Product | ribonuclease PH |
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| Protein accession | YP_001762913 |
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| Protein GI | 170728887 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0689] RNase PH |
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| TIGRFAM ID | [TIGR01966] ribonuclease PH |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000188043 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGCGCCCAA ATGACAGAAC GCCAGCACAA TCTCGCCCAG TGACAATTAC ACGTCAGTTT
ACAGCCCATG CTGAAGGCTC TGTTTTGGTA GAGTTTGGCG AAACTAAAGT GCTGTGTACT
GCAAGTTTCA CCGAAGGGGT GCCACGTTTT CTAAAAGGAA AAGGCCAAGG TTGGGTAACG
GCTGAATATG GCATGTTGCC TCGTTCTACT CATAGCCGCA TGGATCGTGA AGCGGCTCGC
GGTAAGCAGT CTGGCCGTAC TCAAGAGATC CAACGTCTTA TTGGTCGCTC TCTTCGTGCA
GCTGTGGATA TGAAGGCACT TGGTGAAAAT ACCATAGTGA TCGATTGTGA TGTGATTCAA
GCCGATGGCG GTACGCGTAC TGCAGCGATT ACAGGTGCCT GCGTTGCGCT AGTTGATGCG
CTAAACTGGG CTCGTGGCAA AGGTATTTTG AAGAATAACC CACTTAAGTT CCTGATTGCC
GCGGTTAGTG TTGGTATCTA TAAAGGTGAG CCTATCTGTG ATCTCGAATA TATCGAAGAT
AGTGAAGCTG AAACCGATAT GAATGTCGTG ATGACAGAAA CTGGCAAGAT GATCGAGATT
CAAGGTACCG CTGAAGGTGA GCCGTTTAGC CATGAAGAGC TTCTTAGCTT GCTTGAGCTG
GCTAAGCACG GTATTCGTGA GATTGTTGAT GTACAGAAAG CTGCATTGAG CTAA
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| Protein sequence | MRPNDRTPAQ SRPVTITRQF TAHAEGSVLV EFGETKVLCT ASFTEGVPRF LKGKGQGWVT
AEYGMLPRST HSRMDREAAR GKQSGRTQEI QRLIGRSLRA AVDMKALGEN TIVIDCDVIQ
ADGGTRTAAI TGACVALVDA LNWARGKGIL KNNPLKFLIA AVSVGIYKGE PICDLEYIED
SEAETDMNVV MTETGKMIEI QGTAEGEPFS HEELLSLLEL AKHGIREIVD VQKAALS
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