Gene Swoo_4564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4564 
SymbolslmA 
ID6118930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5533468 
End bp5534061 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content47% 
IMG OID641636135 
Productnucleoid occlusion protein 
Protein accessionYP_001762909 
Protein GI170728883 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000269162 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000294752 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGCTGCAA GCCCAAAGAT CAACCGCCGC GAACATATAC TCCAATGTCT AGCCACTATG 
CTAGAAACCA ATCCAGGACA GAGAATCACA ACAGCAAAAT TAGCAGCCGA AGTCGGTGTA
TCTGAAGCCG CTCTTTACCG TCACTTTCCA AGTAAAGCGA GGATGTTTGA GGGATTAATC
GACTTTATTG AAGAGTCGTT ACTGTCGCGC ATCAACCTCA TCATGGATGA AGAGAAGGAC
ACCATGAAGC GTTGTCAGCA TCTGCTACAA CTACTATTGA TATTCGCCGA GCGTAACCCG
GGGATCTCAC GCCTGCTCAA TGGCGATGCA CTTCTCGGTG AACATGATCG CCTCCGTAGC
AGAATAGGAC AGATATTCTC TAAAATTGAG ACCCACCTGA AACAGATCCT GCGCGAAAAA
ACACTCCGTG AAGGCAAAGG TTTTAATCTA GATGAAGCCA TCCTGGCTAA CTTACTGCTG
GCAGTCGCTG AGGGGCGTAT CTCTCAGTTT GTTCGTAGTG AGTTTAAACA AAAACCTACC
ACACACTTTG AAGAGCAGTG GGTATTTATC CAGCAGCAAC TGCTACAGAG TTAA
 
Protein sequence
MAASPKINRR EHILQCLATM LETNPGQRIT TAKLAAEVGV SEAALYRHFP SKARMFEGLI 
DFIEESLLSR INLIMDEEKD TMKRCQHLLQ LLLIFAERNP GISRLLNGDA LLGEHDRLRS
RIGQIFSKIE THLKQILREK TLREGKGFNL DEAILANLLL AVAEGRISQF VRSEFKQKPT
THFEEQWVFI QQQLLQS