| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4554 |
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| Symbol | |
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| ID | 6118920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 5522651 |
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| End bp | 5523541 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641636125 |
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| Product | transporter DMT superfamily protein |
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| Protein accession | YP_001762899 |
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| Protein GI | 170728873 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2962] Predicted permeases |
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| TIGRFAM ID | [TIGR00688] rarD protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00538746 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTTAGTT CAGAACAAAA CAAAGGTATC GCATCCGCCA TATGCGCATA CACCCTTTGG
GGTTTTGCTC CCCTCTATTT TAAACTCCTC GATCAAGTAT CAGCGACTGA GATATTAATC
CATCGAGTGA TCTGGTCTTT TATTTTCGTC ACCCTACTTA TGATGATGTT TGGTGGCTTT
TCTAGACTGA GACAGGTACT TAAACGCCCC AAACAGCTGA TGGTGCTCAC CCTTACTTCA
GTGCTGATTG CTGGTAACTG GTTACTCTTT ATCTGGGCGG TTAACAACGA CCATATGCTG
GATGCGAGTT TAGGTTATTT CATCAACCCT TTGGTCAATG TCATGCTGGG CATGGTGTTT
CTGAGCGAGC GCTTACGTAA GCTCCAATGG CTAGCAGTTA TTTTAGCTGG CACAGGTGTC
TTAGTTCAAT TGATCTCATT TGGCTCTATT CCCCTTGTTT CACTTGGACT TGCTAGCTCC
TTTGGCTTAT ATGGATTATT AAGGAAGAAG GTTAATGTGG ATGCAAAAAC AGGACTGTTA
GTGGAAACTG CGATTCTATT TCCCATCGCT CTACTCTACC TTTTTGCTAA CTTTGGTGAC
TCAATGACAA ACTTGATGAG TAATGAGCTA TCGCTCAACT TGCTATTGAT GGCAGCTGGA
GTGGTCACCA CAATCCCGTT ACTGTGCTTC GCAGCAGCGG CGGTAAGGAT CCCGCTATCT
ATGCTGGGCT TCTTCCAGTA TATCGGCCCA AGTATTATGT TTATCATGGC CATCACTCTC
TATAATGAGC CGTTCGACCT TGAGAAAGGG ATCACCTTTG GCTTTATCTG GAGTGCCTTA
ATCATCTTTA CTATTGATAT GTTTTACAAA AGAAAACCTA TCAAACAGTA A
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| Protein sequence | MLSSEQNKGI ASAICAYTLW GFAPLYFKLL DQVSATEILI HRVIWSFIFV TLLMMMFGGF
SRLRQVLKRP KQLMVLTLTS VLIAGNWLLF IWAVNNDHML DASLGYFINP LVNVMLGMVF
LSERLRKLQW LAVILAGTGV LVQLISFGSI PLVSLGLASS FGLYGLLRKK VNVDAKTGLL
VETAILFPIA LLYLFANFGD SMTNLMSNEL SLNLLLMAAG VVTTIPLLCF AAAAVRIPLS
MLGFFQYIGP SIMFIMAITL YNEPFDLEKG ITFGFIWSAL IIFTIDMFYK RKPIKQ
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