| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4549 |
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| Symbol | |
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| ID | 6118915 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5514948 |
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| End bp | 5516042 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641636120 |
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| Product | 3-isopropylmalate dehydrogenase |
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| Protein accession | YP_001762894 |
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| Protein GI | 170728868 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.412128 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.012049 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTATC AAATAGCGGT ATTAGCCGGA GATGGAATTG GACCTGAGGT GATGGCTGAG
GCGCGAAAAG TGCTCAGTGC TGTAGAGGAG CGATTCGAGC TTGCTATTGA ATATAGCGAA
TACGATATAG GCGGAGCAGC TATCGATAAT CATGGTTGCC CGCTTCCAGA TGTGACTTTA
AAGGGATGTG AAGCAGCTGA TGCCATTCTT TTTGGATCGG TAGGTGGCCC TAAATGGGAG
CACTTACCAC CTAATGATCA ACCTGAGCGT GGTGCCTTAC TGCCGCTTCG TGGTCATTTC
GAGCTATTTT GCAATATGCG CCCGGCAAAA CTCCATTCTG GACTTGAGCA TATGTCACCG
CTGCGCAGTG ATATTTCATC GAAAGGCTTC GATGTGCTAT GTGTTCGTGA GCTGACAGGT
GGCATCTATT TTGGTAAGCC AAAAGGGCGT CAAGGCGAAG GGGAGAGCGA GGAAGCATTC
GATACCATGC GCTATAGCCG TAAAGAGATC AGACGTATTG CAAAGATTGC ATTTGAGGCT
GCTCAAGGTC GTCGCAAGAA GGTTACCTCA GTGGATAAAG CCAATGTACT GGCTTGTTCT
GTGCTGTGGC GTGAAGTTGT TGAAGAGGTG GCCAAAGATT TCCCTGATGT GGAGCTAGAG
CATATCTATA TCGATAATGC GACTATGCAG CTACTACGTC GTCCTAATGA GTTTGATGTC
ATGCTCTGTT CTAACCTGTT TGGTGACATT ATCTCAGATG AGATTGCCAT GTTAACTGGC
TCTATGGGGC TGCTTTCATC GGTGAGTTTG AACAGTAAAG GCTTTGGTCT CTATGAGCCT
GCTGGTGGCA GTGCACCGGA TATTGCAGGG CAAGGTATTG CTAACCCTGT TGCCCAGATC
TTATCTGCTG CATTACTACT GCGCCATAGC TTGAAATTAG AAGAGGCCGC TACGGCAATC
GAGGCCGCCG TTGGTAAAGC GCTGAGCGAT GGTTATCTAA CTGGCGAGTT GCTACCGGCT
GATGAGCGAG TGAATGCGAA GACGACTTCA CAGATGGGTG ATTATATTGC CCAAGTTATT
AAAGAGGGCG CATAA
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| Protein sequence | MSYQIAVLAG DGIGPEVMAE ARKVLSAVEE RFELAIEYSE YDIGGAAIDN HGCPLPDVTL
KGCEAADAIL FGSVGGPKWE HLPPNDQPER GALLPLRGHF ELFCNMRPAK LHSGLEHMSP
LRSDISSKGF DVLCVRELTG GIYFGKPKGR QGEGESEEAF DTMRYSRKEI RRIAKIAFEA
AQGRRKKVTS VDKANVLACS VLWREVVEEV AKDFPDVELE HIYIDNATMQ LLRRPNEFDV
MLCSNLFGDI ISDEIAMLTG SMGLLSSVSL NSKGFGLYEP AGGSAPDIAG QGIANPVAQI
LSAALLLRHS LKLEEAATAI EAAVGKALSD GYLTGELLPA DERVNAKTTS QMGDYIAQVI
KEGA
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