| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4544 |
|---|
| Symbol | |
|---|
| ID | 6118910 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 5508932 |
|---|
| End bp | 5510419 |
|---|
| Gene Length | 1488 bp |
|---|
| Protein Length | 495 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641636115 |
|---|
| Product | glycerol kinase |
|---|
| Protein accession | YP_001762889 |
|---|
| Protein GI | 170728863 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0554] Glycerol kinase |
|---|
| TIGRFAM ID | [TIGR01311] glycerol kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0143138 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACTAAAA AATATGTTGT GGCACTGGAC CAAGGAACTA CCAGTTCCAG AGCGATTATT
TTCGATCATG ATGCGAATAT TGTGTCGGTT TCACAGCGTG AGTTTACTCA AATTTATCCC
CAAGCGGGTT GGGTTGAACA TGATCCTATG GAGATATGGG CATCCCAGAG TTCCACTTTA
ATAGAGGTCA TAGCACGAAG TGGGATCCAT GCCAGTGAGA TCGCATCGAT TGGGATCACC
AATCAACGTG AGACAACGGT TATCTGGGAT AAGCAAACTG GCAAGCCAGT TTATAACGCC
ATTGTTTGGC AGTGCAGACG CAGCAGTGAG ATCTGTGAGG AGCTTAAATC TCAAGGATTA
GAGGCGTATA TTCGAGATAC TACAGGCCTA CTCTTAGACC CTTACTTTTC TGGCACGAAA
ATTAAATGGA TTTTAGACAA TGTTTCGGGC GTGAGGGAGC GGGCTGAAAG AGGTGAGCTG
CTATTTGGCA CCATAGATAC TTGGCTTGTA TGGAAGCTGA CTGAAGGTAA AGTTCATGTT
ACCGATCCCA CCAATGCCAG TCGTACTTTA TTGTTCAATA TCCATACCCA AAGCTGGGAT
AAGAGAATAC TTGAAGCATT AACTATCCCT GAATCTCTTC TTCCTCAAGT GAAACCCTCT
AGTGCCGTCT ATGGTAAAAC GCGTATCGCA GGCGAAGGAG GAGAGATCTC CATTGCTGGG
ATTGCTGGCG ATCAGCAATC TGCGCTCTTT GGTCAGCTAT GTACTGAGCC GGGGATGGCA
AAGAATACCT ATGGTACTGG CTGTTTTCTT CTGATGAATA CAGGAGAGAA AGCAGTAAAG
TCGAATCATG GTCTACTGAC AACCATAGCA ATTGGTGCCA AGGGAGAGGT GAACTATGCT
CTGGAGGGCT CAGTATTTAT GGGAGGTGCG ACGATTCAAT GGCTAAGAGA TGAGCTTGGA
TTAATCAGAG ATGCTCAGGA TACTGAGTAT TTTGCCTCAA GAGTCGAGAG TACAAATGGC
GTATATCTGG TACCAGCCTT CGTTGGTTTA GGAGCGCCCT ATTGGGATCC TAGTGCCAGA
GGGGCATTAG TAGGGCTGAC CCGAGGTTCA AATCGAAACC ACATTATTCG AGCGGCACTG
GAAGCTATAG CCTATCAGAG CAGAGATCTG CTCGATGCAA TGGCTAAAGA CAGTGGTGTG
GAGCTAAAGA AACTTAAAGT CGATGGTGGC GCAGTTGCCA ATGACTTTTT GATGCAGTTT
CAAGCCGATA TAACTTCGGT TGAGGTGCAG CGACCAGCTG TTACAGAAAC TACGGCTATG
GGAGCTGCGT TTCTTGCAGG TCTAGCTGTG GGATTCTGGG ACTCTACCTC AGAGCTTAAG
CACAGGGCCG ATATCGACAA ATCTTTTATG CCATCTATCA GTGAAGAGCA AAAAGATGAG
TTATATGCAG GCTGGCAAAA GGCTGTCTCA CAAACGATTA ATGGATAA
|
|---|
| Protein sequence | MTKKYVVALD QGTTSSRAII FDHDANIVSV SQREFTQIYP QAGWVEHDPM EIWASQSSTL
IEVIARSGIH ASEIASIGIT NQRETTVIWD KQTGKPVYNA IVWQCRRSSE ICEELKSQGL
EAYIRDTTGL LLDPYFSGTK IKWILDNVSG VRERAERGEL LFGTIDTWLV WKLTEGKVHV
TDPTNASRTL LFNIHTQSWD KRILEALTIP ESLLPQVKPS SAVYGKTRIA GEGGEISIAG
IAGDQQSALF GQLCTEPGMA KNTYGTGCFL LMNTGEKAVK SNHGLLTTIA IGAKGEVNYA
LEGSVFMGGA TIQWLRDELG LIRDAQDTEY FASRVESTNG VYLVPAFVGL GAPYWDPSAR
GALVGLTRGS NRNHIIRAAL EAIAYQSRDL LDAMAKDSGV ELKKLKVDGG AVANDFLMQF
QADITSVEVQ RPAVTETTAM GAAFLAGLAV GFWDSTSELK HRADIDKSFM PSISEEQKDE
LYAGWQKAVS QTING
|
|---|
| |