| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4538 |
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| Symbol | murE |
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| ID | 6118904 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5502894 |
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| End bp | 5504402 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641636109 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase |
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| Protein accession | YP_001762883 |
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| Protein GI | 170728857 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
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| TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0149307 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTACTAA AAGATCTATT AGCACCTTGG TTCCATTACT CAGGATCTGA GAGTGTTAAC
AAGTTGAGCC TTGATAGCCG TGAGGTAGAC CAAGGCGATC TGTTTGTTGC TGTGCCTGGT
CATCAAGTTG ATGGTCGAGA TTACATTGAT GTGGCGGCAA AAAATGGTGC ACAAGTGTCA
CTGGTGCATA CTGACAACCC CGAGATGCAC GGTAAGGTTT TGACTAGCAA CAGCACCCAG
ATTTTTTTCT TTCAGCTAAG CCGTCAGCTC TCTGCTTTGG CTGCTCAGGC CTATCCACTG
CCTGTTGAGC GTTTGAAATT AGTTGGTGTC ACAGGCACAA ATGGTAAAAC TTCTATTACG
CAGCTTATGG CGCAACTGTT AGTTTGTTTA GGCAAACAGC CTGCTGTGAT GGGAACCTTA
GGTAATGGAC TTTGGGGAGG GTTAGTCGAC AGTGGTAATA CAACCGCCGA CCCTATTACC
ATCATGGCTC AACTTAACGC TTTTAATGAG CTGGGTGCAG ATCTGTGTGC AATGGAAGTA
TCAAGCCATG GCCTGATACA GGCAAGAGTC GATGCGGTCC CCTTCGACTT GGCTATTTTT
ACTAATTTAA GCCGAGATCA TCTTGATTAT CATGGCACTA TGCAGGCCTA TGGTGAGGCT
AAGTTCAGGT TATTTAAGTT CCCCTCTCTA AAGTCAGGCG TTATCAACCT TGATGATGAT
TTAGGTAAGC AGTGGTTGGC TCAAAGTGAT TCAGCCAAGC TGATTGGTTA TAGCATTGCT
GGCGATAGTG ACACTGTTTC TCAAGATGCA GCTATTTATA CCAAAGGTAA CCATTTTCAT
AATCAAGGTG TCAGAGCAAA GCTTGTATGG CCCGAAGGCT GCGGCAATAT TGACTCCCCT
CTGCTAGGTG CATTTAACCT GTCAAACTTG CTTGCAGCTT TAGCGGGCCT TTATCAACTT
GGTTTTGATA TGAATGCCCT GCTTAATGCC GTGCCAAAGC TGAATGCCGT TGCTGGACGA
ATGGAGCAGT TTACTACTGA AAACGGTATC ACACTTGTGG TGGATTATGC CCATACTCCC
GATGCTATTG AACAGGCACT TAAGGCGCTA AGAGGTCACT GTGAGGGTGA GCTGTGGTGT
CTATTTGGTT GTGGCGGCGA TCGTGATAAA GGCAAGCGTC CTTTAATGGC GCAGTCTGCT
GAAGCGTATG CCGACCGTAT TATGGTGACC AGTGATAATG CTAGAAGCGA GTCTCCAGAT
GAGATAATTA ATGACGTATT GGCAGGGCTT AATCGCCCTG AACGTGCGGT TACACAAGTG
GATCGTGAAC TGGCGATTAG AGAGGTGCTA GCCGCCGCTA AACCTGGCGA CCTTATTTTG
CTGGCAGGTA AGGGGCATGA AACCTATCAA GAGGCCGGTG GTGTGCGACG TGATTATGAT
GAACGTGCAT TAGCTCGCAG TTTAGCAAGT GGAAGTTTAG CTAATAATAG TTCTGAGGTA
GATAGATGA
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| Protein sequence | MLLKDLLAPW FHYSGSESVN KLSLDSREVD QGDLFVAVPG HQVDGRDYID VAAKNGAQVS
LVHTDNPEMH GKVLTSNSTQ IFFFQLSRQL SALAAQAYPL PVERLKLVGV TGTNGKTSIT
QLMAQLLVCL GKQPAVMGTL GNGLWGGLVD SGNTTADPIT IMAQLNAFNE LGADLCAMEV
SSHGLIQARV DAVPFDLAIF TNLSRDHLDY HGTMQAYGEA KFRLFKFPSL KSGVINLDDD
LGKQWLAQSD SAKLIGYSIA GDSDTVSQDA AIYTKGNHFH NQGVRAKLVW PEGCGNIDSP
LLGAFNLSNL LAALAGLYQL GFDMNALLNA VPKLNAVAGR MEQFTTENGI TLVVDYAHTP
DAIEQALKAL RGHCEGELWC LFGCGGDRDK GKRPLMAQSA EAYADRIMVT SDNARSESPD
EIINDVLAGL NRPERAVTQV DRELAIREVL AAAKPGDLIL LAGKGHETYQ EAGGVRRDYD
ERALARSLAS GSLANNSSEV DR
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