| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4532 |
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| Symbol | murC |
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| ID | 6118898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5495271 |
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| End bp | 5496740 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641636103 |
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| Product | UDP-N-acetylmuramate--L-alanine ligase |
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| Protein accession | YP_001762877 |
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| Protein GI | 170728851 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
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| TIGRFAM ID | [TIGR01082] UDP-N-acetylmuramate--alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.323357 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00231848 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGTAACG ATAAAGAGAA GTATTCAAAA TTAAGAAACA TCATTCCTGA GATGAGACGT
GTTAAGCACA TCTATTTTGT CGGGATTGGT GGTGCGGGCA TGGGTGGCAT AGCCGAAGTA
CTCGTCAATG AAGGTTATCG TTTATCAGGC TCTGATATCG CTGAAAATGC CGTTACGCAA
AGACTGGCGT CGTTGGGAGC AAAGATTCAT CTTGGTCATA AAGAGGAGCA GGTACATGGC
GCCGATGTTG TTGTCGTCTC TACCGCTATT CATGCCGATA ACCCTGAGTT ATTAGAGGCA
CAGGCATTAA GAATACCTGT GGTTCGCCGG GCAGAGATGT TAGCAGAGCT GATGCGTTAT
CGTCACGGGG TGGCAGTTGC TGGAACCCAT GGCAAAACGA CCACAACCAG TTTAATTGCC
AGTGTCTATG GTCAAGCTGA GCGAGATCCA ACCTTTGTCA TTGGTGGACT GTTAAACAGT
GCGGGAACCA ATGCCAGATT AGGTAATAGC CGCTACTTGA TTGCGGAAGC TGATGAGAGT
GATGCAAGTT TTCTCCATCT GCAACCCATG GTAAGCGTTA TCACCAATAT CGAAGCGGAT
CATATGGACA CCTATGAGGG GGATTTTGAA CGATTAAAGT CTACCTTCAT CGATTTCCTC
CATAACCTGC CATTTTATGG CATCGCGGTT ATGTGTATTG ACGATCCTGT TGTGCGTGAG
CTTCTTCCTA GCGTGGGCCG CAAAATTGTG ACCTACGGCT TTAGTGAAGA TGCTGATGTT
CAGGCGCTGA ATTTTGTTCA GGATGGGTAC CGTAGTCGTT TCACATTAAG AAGAACTGGT
GTTGAAGATG TGGAAGTGAT GGTGAACCTG CCTGGTGAGC ATAATGTACT TAATGCTTTG
GCTGCCATAG CTGTTGCCAG TGAAGATGAG ATTGAAGACG AAGCAATTAT TCAGGCGCTG
GCCGATTTCG AAGGAATTGG TCGTCGATTC GAGCAGCTTG GCTGTTTCGA TACCGATAGA
GGTGAAGTGG TTTTAGTTGA TGATTATGGC CATCACCCCA GTGAGGTGGC GGCGACAATT
AAAGCGGCGA AACTGGGTTG GCCTGAAAAG CGTTTAGTGA TGATCTATCA GCCCCATCGC
TATAGCAGAA CTCGCGATCT CTATGAAGAC TTTGTTGAAG TGCTGTCGCA AGTCGATTGT
TTATTGCTGC TCGATGTTTA TTCTGCTGGA GAAGCTGCAA TACCAGGAGC TGACAGCCGA
GCCCTGTGCC GCTCTATCCG TCTACGAGGT CAACTAGATC CTATCTTTGT GGCAGATCAA
GAGCAGTTGC TGACCTTGCT ACCGGATGTA CTGCAGGAGG GGGATCTCCT GTTGACTCAA
GGCGCCGGAA ATATCGGTGC ATTAGCAAGG CAGTTAGCCC AGAACAGATT AGGTTTTGAA
TCAACAAACA ATGATTCGAA TAGGGGATAA
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| Protein sequence | MGNDKEKYSK LRNIIPEMRR VKHIYFVGIG GAGMGGIAEV LVNEGYRLSG SDIAENAVTQ
RLASLGAKIH LGHKEEQVHG ADVVVVSTAI HADNPELLEA QALRIPVVRR AEMLAELMRY
RHGVAVAGTH GKTTTTSLIA SVYGQAERDP TFVIGGLLNS AGTNARLGNS RYLIAEADES
DASFLHLQPM VSVITNIEAD HMDTYEGDFE RLKSTFIDFL HNLPFYGIAV MCIDDPVVRE
LLPSVGRKIV TYGFSEDADV QALNFVQDGY RSRFTLRRTG VEDVEVMVNL PGEHNVLNAL
AAIAVASEDE IEDEAIIQAL ADFEGIGRRF EQLGCFDTDR GEVVLVDDYG HHPSEVAATI
KAAKLGWPEK RLVMIYQPHR YSRTRDLYED FVEVLSQVDC LLLLDVYSAG EAAIPGADSR
ALCRSIRLRG QLDPIFVADQ EQLLTLLPDV LQEGDLLLTQ GAGNIGALAR QLAQNRLGFE
STNNDSNRG
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