Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4505 |
Symbol | |
ID | 6118861 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 5451057 |
End bp | 5451989 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641636067 |
Product | band 7 protein |
Protein accession | YP_001762851 |
Protein GI | 170728825 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0455266 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGCAG GTATAGACAC AGATTTAATC GTACTGGGTA TTTGGGGGCT TATCTTTGCC ATTTTCGTCA TCAAGCTCTT TCAATCTATC CGCTTAGTGC CGACTAAATC GGCGTATATC GTAGAGCGTT TGGGTAAGTA TCACTCCACC TTAGATGCGG GCTTTCATGC CCTAATTCCC TTTGTGGATA AGGTCGCTTA TATTCACGAT CTTAAAGAGG AGACCATAGA CGTGCCGCCA CAGGAGTGTT TCTCCAGTGA TGAGGTGAAT GTCGAGGTTG ATGGCGTTAT CTACATCTCG GTAATGGATC CAGTTAAAGC CAGCTACGGT GTGGTGGATT ACCGTTATGC AGCGATTCAA CTGGCGCAAA CGACCACACG CTCAGTGATA GGGACACTTG ATCTAGACCG TACTTTTGAG GAGCGAGATG TCATCAGTGC CAAAGTGGTT GAGGTGTTAG ATCAAGCTGG TGCCATGTGG GGAATACGTG TTCACCGTTA TGAGATAAAA AACATTACCC CGCCGGAGAC GGTGAAAAAC GCCATGGAGA TGCAGGTCAA CGCAGAGCGT GAACGTCGTG CATTACTGGC CAAGAGTGAA GGTGACAAGC AGAGTAAGAT CAACCGCTCT GAAGGTATCA AAGCCGAGAT GATCAATATC TCTGAAGGTG AGATGCAAAA GCGTATTAAC GAAGCTGAAG GTAAAGGCGA AGAGATTATT ACCATCGCCA GAGCCACCGC TGATTCTATC GAACGTATGG CCGCTGTCAT TGCAGCTCCG GGCGGTAAAA ACGTTGTGCG TATGCAGTTA GGTGCTGAGT ATCTTAAACA GTTTGACGGC CTAAGCAGTA ATGGCAGCAA GGTCGTACTG CCTGGGAACC TGATGGACTT TGAACACTGG ATGGACAGTA TCGGTCTGGA AGAGACTAAA TAA
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Protein sequence | MIAGIDTDLI VLGIWGLIFA IFVIKLFQSI RLVPTKSAYI VERLGKYHST LDAGFHALIP FVDKVAYIHD LKEETIDVPP QECFSSDEVN VEVDGVIYIS VMDPVKASYG VVDYRYAAIQ LAQTTTRSVI GTLDLDRTFE ERDVISAKVV EVLDQAGAMW GIRVHRYEIK NITPPETVKN AMEMQVNAER ERRALLAKSE GDKQSKINRS EGIKAEMINI SEGEMQKRIN EAEGKGEEII TIARATADSI ERMAAVIAAP GGKNVVRMQL GAEYLKQFDG LSSNGSKVVL PGNLMDFEHW MDSIGLEETK
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