Gene Swoo_4490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4490 
Symbol 
ID6118846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5430479 
End bp5432524 
Gene Length2046 bp 
Protein Length681 aa 
Translation table11 
GC content45% 
IMG OID641636052 
Productpeptidase S9 prolyl oligopeptidase 
Protein accessionYP_001762836 
Protein GI170728810 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGAAAG TCGGACTGTT ACTGCTTTGT ATTATCTTGA TGCCGCTGGC ACCTGTATAT 
GCAGAGCAGG CAAAGCCTGT GGATGATAAA CGACTGTCTG TTGAGCTATT GTGGCAGCTA
AATCGCATCG CAAGCCCCAC AATTTCATCC AATGGTGAGT TCATTATTGC CCCTGTCACT
CAATATGATG TTCCTGAAGA TAAAGGCGCA ACACAGCTAT GGTTGTTTGC TAAAGATGGC
TCTAGTCAGC GTCCTTTGAC TGCCAAAGGA TTGCGGGTGA GTGAGCCAGT GTTCTCCCCT
GACAGCAAGG TGCTCGCATT TGTGAGTAAG CGTGATGAAG ATGAGGATGG GCAGATATAC
CTATTACCTA TGGATAGAGC TGGTGAAGCT CAGCGACTCA CAGATGTCCC TGGTGGGGTC
AAAGGGGTGA AGTGGGTAGG TGAACATGTT TACTTTATTA GCCGTGTTTT CCCAGATAAA
ACATGGCCTG AGATGGCTGA ACAGTTAACG GCGAATAAAA AGGATAAAGT GTCTGCCCGT
CAGTGGAATG CACTACCCTA TTCGAGCTTT GACCATTGGA TAGAGGAGGA TCGTCAAGCT
CATGTTTTTC GTATTCCCGC TAAAGGGGGC GAGGTTGAAG CAGTGACACA AGCGATGAAC
AAGCAACTGC CTCGTTCATC CCAAAGTGCT GCGAACTATG ATATTTCGCC TGATGAGCGC
TTTATCGCCT TTAACAGCAA TGGTTGGGAC AATCGAGTCG ATCCAAAAAT TGATATCTTT
TTGGCTAAGA TAGGCAGTGA TAAGGCGGAA AATGTAACGG CAAAAAATAA CGCTCCAGAT
ACGAATCCAA CCTTCAGCCC AGATGGTAAA ACCTTAGCTT TTACCCGTCA GCTTATTCAT
GGATTTTATG CCGATACAGC CAACCTGATC TTGCTTGATG TAAAAAAGCG CACAGAGCGA
AATATTACCG CCGATTGGGA CCGCTCGGTA GCTCGCTTTA GCTGGACAGC AGATAGCAAA
GGTTTTTATG CGGCAATCGA TGATGCTGCT ACTCGTCGAA TTTTCCATAT CAATGGCAAA
AACGGCAAGG TAAGAGCCAT TACTCAGCAG ACCAATTTTG GCAGGCTTTC AATTGCAAAA
GACGGCACAT TAATCGCGTC TAATGATAGC TTCCTCTACC CAGCTAGAGT GGTTAAAATC
AATCCTAAAA ATGGTAAAAC CACACGTTTG GATAGCTTCA ATGACGATAT TCTTGCCGAT
GTCGATATGG GAACTTATGA GTCAGTAACT TATAAAGGCT ACAACGACCA AGATATACAG
ATGTGGGTTC ATTATCCGCC AGGATTTGAT TCTAGCAAAA AGTATCCCTT GATGATGTTG
ATCCATGGAG GGCCACATAG CGCTATCTCT GATGGTTTCC ACTTCCGTTG GAATGCCCAA
ACATTTGCTT CTTGGGGCTA TGTTACAGCT TGGCCTAACT TCCATGGCTC AAATAGCTTT
GGCCAAGAGT TTGCCGACAG TATAAATCCC GATTGGAAAA ATAAATCACT GGAAGATGTC
TTTAAGGCAA CGCAGTGGTT TACCGAGAAA GAGTGGATTG ATGATGAGCG ACTAGTGGCG
GGCGGAGCAA GTTATGGTGG CTACCTAACT TCAATTATTT TGGGGCAAGA GCATCCATTT
AATGCCCTGT TTATTCACGC TGCGGTCTAT AACATGTACT CGCAAATGGC GGCGGACTTC
TCTGTCCACA GCACTAGGTT TGGTAACTAT TGGGATAAGC CTGAGCTCTA CAATGCTATC
TCTCCCCACT ACGGTGCTAA AAACTTCAAT ACTCCAACCT TAGTGGTTCA TGGCCAACTG
GATTACCGCG TTCCAGTAGG CCAAGGTTTT GAGCTATTTC GTACCTTGCA AACACGAGGT
GTAGAATCTC GAATGATCTA CTTCCCCGAT GAAAATCATT GGATTATGAA GCCAAATAAT
TCAATCTATT GGTATAACCA AGTTGAAGAT TGGATGACTA AGTTTGCTGA GCCTGGTGGT
AAGTAA
 
Protein sequence
MKKVGLLLLC IILMPLAPVY AEQAKPVDDK RLSVELLWQL NRIASPTISS NGEFIIAPVT 
QYDVPEDKGA TQLWLFAKDG SSQRPLTAKG LRVSEPVFSP DSKVLAFVSK RDEDEDGQIY
LLPMDRAGEA QRLTDVPGGV KGVKWVGEHV YFISRVFPDK TWPEMAEQLT ANKKDKVSAR
QWNALPYSSF DHWIEEDRQA HVFRIPAKGG EVEAVTQAMN KQLPRSSQSA ANYDISPDER
FIAFNSNGWD NRVDPKIDIF LAKIGSDKAE NVTAKNNAPD TNPTFSPDGK TLAFTRQLIH
GFYADTANLI LLDVKKRTER NITADWDRSV ARFSWTADSK GFYAAIDDAA TRRIFHINGK
NGKVRAITQQ TNFGRLSIAK DGTLIASNDS FLYPARVVKI NPKNGKTTRL DSFNDDILAD
VDMGTYESVT YKGYNDQDIQ MWVHYPPGFD SSKKYPLMML IHGGPHSAIS DGFHFRWNAQ
TFASWGYVTA WPNFHGSNSF GQEFADSINP DWKNKSLEDV FKATQWFTEK EWIDDERLVA
GGASYGGYLT SIILGQEHPF NALFIHAAVY NMYSQMAADF SVHSTRFGNY WDKPELYNAI
SPHYGAKNFN TPTLVVHGQL DYRVPVGQGF ELFRTLQTRG VESRMIYFPD ENHWIMKPNN
SIYWYNQVED WMTKFAEPGG K